Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2020 |
Symbol | |
ID | 6486139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1965723 |
End bp | 1966343 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642737379 |
Product | hypothetical protein |
Protein accession | YP_002041129 |
Protein GI | 194442392 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1495] Disulfide bond formation protein DsbB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.00618723 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTGTATGA AAACGCATCA TCATCCAACA ACACTTGTTC ATCTGATTAA TCAGGTGGGA CTCCTTGGGA TATGCGTTGC TCTGGTTGTA GCCTTTTATT ATCAACTCGT TAGGCATGAG CTGCCTTGTC CAATTTGCTT ATTACAGCGG GCTGGCCTCA TCATCGCCGG TTTTGGCTTT TTATTTAACC TCTGCTTTGG TCTACGAGGT ATACATTACG GGATGGTAAT TATTGGCAGT ATCCTGACCG GAGTTATGGC ATCCCGGCAA ATATGTTTGC ATATCATGCC CGGTGACACA GGATATGGTT CTGCATTTTT TGGATTACAC TTTTATACCT GGACTCTGAT TACGTCAATT CTGATTATTA TTGCTGTTGC GGTGGTTCTG GCAATCAGTA GCATGAATGT TGCATTTCGT TCATTGAATA TTAATCCGGA CCTGTTCAGT ATTGTCGGTT GGGTATTTCT GTTACTGATT ACTGCCAACC TTATTTCAAC TGTACTGGAA TGTGGCGGAG GGGAATGTGC TGCTAACCCG GTCACATATA AGCTACTGTC GAAACAGGAT ATTGCCTTTC TGAAAACAGG CCTCCTGACG AGGGCAGTTC TCCGGTTATG A
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Protein sequence | MCMKTHHHPT TLVHLINQVG LLGICVALVV AFYYQLVRHE LPCPICLLQR AGLIIAGFGF LFNLCFGLRG IHYGMVIIGS ILTGVMASRQ ICLHIMPGDT GYGSAFFGLH FYTWTLITSI LIIIAVAVVL AISSMNVAFR SLNINPDLFS IVGWVFLLLI TANLISTVLE CGGGECAANP VTYKLLSKQD IAFLKTGLLT RAVLRL
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