Gene SNSL254_A2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2016 
Symbol 
ID6483208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp1962851 
End bp1963219 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content48% 
IMG OID642737375 
Productputative cytoplasmic protein 
Protein accessionYP_002041125 
Protein GI194446100 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.00544327 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATCG CTCTGCCACT TTCGCTCAAC CTTCCTTCCA TGGGTTTACG CCTCAGTACG 
GTGATTGAGC GTTGCCGCCT GGTAAGCCGT AGCGAATACC TTATCAGCGC TGGCATACGC 
AAAAACAGCC CGAACGGGAG TATTCATCCT AATAGCCTGA CTAAAAAATT TGTTGCGGCA 
CGAAAATTGA CCGGAATAAA TTTCAGTGAA AACCCACCGC CGTTTCACGA GATCCGCAGC 
TTATCCGGAC GACTGTATAA AGACGCTTAC GGCGAAGGGT TTGCTCAGAA ACTCCTGGGA 
CATACTTCAG AGAACACCAC GAAACTCTAT CTCGATGAAC GCGATAATAA AGCTTACGTG 
ATGCTCTGA
 
Protein sequence
MKIALPLSLN LPSMGLRLST VIERCRLVSR SEYLISAGIR KNSPNGSIHP NSLTKKFVAA 
RKLTGINFSE NPPPFHEIRS LSGRLYKDAY GEGFAQKLLG HTSENTTKLY LDERDNKAYV 
ML