Gene SNSL254_A2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2006 
Symbol 
ID6485704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp1955941 
End bp1956951 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content34% 
IMG OID642737370 
Productputative O-actetyl transferase related protein 
Protein accessionYP_002041120 
Protein GI194446368 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.14835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.0070319 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGTCTG TTGTTGCTGG ACACATTGCA AATTTCCCAT TTGGGGAGGT ATTCTATTAC 
TATCAAGTTG CCGGATTTTT TCTGCTATCG GGTTATTTCT TTCATTACGA CAAGTATGCT 
GACAGATTTA GTAAATTTTT AAAAAGCAGA TCAAAGCTTA TTTGTCAGTA CCTTATTTAT 
TCTGCGATAA TCATATCGAC GCATAATTTA CTTACTGAGT TTGGGTTACA ACCTACAAAT 
TACATTTATT ACTCACCTGC TGATTATGTC ACAGCATTTA TACGGTCTAT AACAATACCA 
TCTGAAGCAC TGGCAGGTGC AATGTGGTTC ATACCAGTAT TGATTTTAAT GCAGTTTGTT 
TTTTATTGGC TAAATAGAGT GGTTAAAGAA AATAAACTGC TAATTGGATC TTCAGTTTTA 
ATTTTATTCT TCATTGGTTG GTGGATTGTA AAAAGTAATG CAATTGCTAA TAATCCCTAC 
ATAAACACTC ACATTCCAAA CGCACAATAC TTCGTCTATT TGCCGTTTTT CTACATAGGC 
TATGTATTTA AAAAATTTGG ATTCAAATCC TTGAGCAGCA TAAATGCTAT GCTGCCAGCG 
CTAATCGTCA TAGTCCTTAG TTACATTGTA ATACGGCCAA CTATGTATTT ATACGGAAGC 
ATTGATCCGT ATTGCTTTAT CTTTTTATCG CTTATTAGCA TTTCTCTCGT AATTGGTATT 
TCTTACCACA TAAAATCTAA CATACTCGTT AGATTCTTCA CAACAATAGG CGAGAATACA 
GTACACATTC TCGCTATGCA CTTCTTCTTT TTCAAGATAG CAACTCTTCT ATTAACCATT 
GTAGGGCTCA AGCAAATTGA TGATCTTCAT CGCATTGACG GCCCATCTAA TGGGTCAATC 
ATTGAAACAA TAACATATCT TTCATTCGGT ATAGTTTTCC CATTAGTTCT TGTATCATTA 
GTAAGGAAGA TAAGAAGTAA GATTTTTGTA AATAAATATT CTCCGGCATA G
 
Protein sequence
MLSVVAGHIA NFPFGEVFYY YQVAGFFLLS GYFFHYDKYA DRFSKFLKSR SKLICQYLIY 
SAIIISTHNL LTEFGLQPTN YIYYSPADYV TAFIRSITIP SEALAGAMWF IPVLILMQFV 
FYWLNRVVKE NKLLIGSSVL ILFFIGWWIV KSNAIANNPY INTHIPNAQY FVYLPFFYIG 
YVFKKFGFKS LSSINAMLPA LIVIVLSYIV IRPTMYLYGS IDPYCFIFLS LISISLVIGI 
SYHIKSNILV RFFTTIGENT VHILAMHFFF FKIATLLLTI VGLKQIDDLH RIDGPSNGSI 
IETITYLSFG IVFPLVLVSL VRKIRSKIFV NKYSPA