| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1987 |
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| Symbol | |
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| ID | 6486788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 1942980 |
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| End bp | 1944263 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642737352 |
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| Product | integral membrane protein PqiA family |
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| Protein accession | YP_002041102 |
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| Protein GI | 194444095 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
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| TIGRFAM ID | [TIGR00155] integral membrane protein, PqiA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.04812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.00476807 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTCTGA ACACCTCACA CGTCACGCCA ACAAAAAAGC TAACGATCAG GTCAATTAGC
GAAGCGCTGC CGCGCAGCCA CTACCAGCGC TGCCCTGAAT GCGACATGCT GTTCAGCTTG
CCGGAGATGA GCGCTCATCA AAGCGCTTAT TGTCCTCGTT GCCAGGCCAA AATTCGCGAT
GGGCGCGACT GGTCGCTGAC GCGGCTGACC GCGATGGCGG TAACCATGCT GCTATTGATG
CCGTTTGCCT GGAGCGAACC GTTACTCCAT ATCTACCTAT TGGGCGTACG CATTGATGCC
AATGTGATGC ACGGCATCTG GCAAATGACG CAGCAGGGCG ATCCGTTAAC CGCCGCAATG
GTGCTCTTTT GCGTGGTGGG CGCGCCGCTT ATTCTGGTAT TTTCAATTGC TTACCTGTGG
TTTGGCAGCC TCCTCGGCAT GAATCTGCGT CCAGTCCTGC TGATGTTGGA AAAACTGAAA
GAGTGGGTGA TGCTGGACAT CTATCTGGTC GGTATTGGCG TTGCCTCTAT CAAAGTGCAG
GACTATGCCT TTCTGCAGCC GGGCATCGGG CTTTTAGCGT TCGTCTCGTT GGTGGTTCTT
AGCATTCTGA CTATGATTCA TCTGAATGTG GAGCAACTAT GGGAACGATT TTATCCGCAG
CGCCCTGCTC AACGTGCGGA CGAAAGATTG CGCGTCTGTC TTGGCTGCCA CTTTAGCGGC
TATCCGGATG CGAAAGGACG CTGCCCGCGT TGTCATATTC CGCTACGGTT ACGCAGAAAA
CAGAGCATAC AGAAGTGTTG GGCGGCCTTG CTGGCGTCTA TTGTCTTTTT GCTGCCGGCA
AACCTGCTGC CTATCTCGGT AATCTACATT AATGGCGGGC GTCAGGAAGA TACTATCCTG
TCGGGCATTA TGTCGCTTGC CAGCAGCAAT ATCGCCGTCG CCGCCGTCGT TTTTATCGCC
AGTATTTTGG TGCCGTTTAC CAAAGTCATC GTGATGTTTA CGCTACTGTT GAGTATCCAT
TTTAAATGCC AACAGGGACT GCGGACGCGA ATTCTGTTGC TGCGTCTGGT GACATGGATA
GGCCGCTGGT CGATGCTTGA TCTTTTCGTT ATCTCGTTAA CCATGTCTCT GATTAATCGC
GATCAGATTC TGGCTTTTAC TATGGGACCG GCTGCGTTTT ATTTCGGCGC AGCGGTAATT
TTGACTATTC TTGCAGTGGA ATGGCTGGAT AGCCGCTTAC TTTGGGATGC ACATGAGTCA
GGAAACGCCC GCTTCGAAGA CTGA
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| Protein sequence | MALNTSHVTP TKKLTIRSIS EALPRSHYQR CPECDMLFSL PEMSAHQSAY CPRCQAKIRD
GRDWSLTRLT AMAVTMLLLM PFAWSEPLLH IYLLGVRIDA NVMHGIWQMT QQGDPLTAAM
VLFCVVGAPL ILVFSIAYLW FGSLLGMNLR PVLLMLEKLK EWVMLDIYLV GIGVASIKVQ
DYAFLQPGIG LLAFVSLVVL SILTMIHLNV EQLWERFYPQ RPAQRADERL RVCLGCHFSG
YPDAKGRCPR CHIPLRLRRK QSIQKCWAAL LASIVFLLPA NLLPISVIYI NGGRQEDTIL
SGIMSLASSN IAVAAVVFIA SILVPFTKVI VMFTLLLSIH FKCQQGLRTR ILLLRLVTWI
GRWSMLDLFV ISLTMSLINR DQILAFTMGP AAFYFGAAVI LTILAVEWLD SRLLWDAHES
GNARFED
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