Gene SNSL254_A1966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1966 
Symbol 
ID6483593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1921745 
End bp1923109 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content56% 
IMG OID642737333 
ProductL-serine ammonia-lyase 
Protein accessionYP_002041083 
Protein GI194442772 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1760] L-serine deaminase 
TIGRFAM ID[TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTAGCC TATTCGACAT GTTTAAGGTA GGGATTGGTC CCTCCTCTTC CCACACTGTT 
GGCCCGATGA AGGCCGGTAA ACAGTTCGTC GATGACCTGG TCGAAAAAGG ATTACTGGAT
AACGTTACCC GCGTCGCTGT CGATGTCTAC GGCTCGCTGT CGCTGACGGG GAAAGGTCAC
CATACCGATA TCGCCATTAT TATGGGCCTG GCGGGTAATG AACCCGCTAC CGTGGATATT
GATAGTATCC CCGGTTTTAT TCGCGACGTC GAAACGCGCG AGCGTCTGTT ACTGGCCCAG
GGACGTCACG AAGTCGACTT CCCGAAAGAT GACGGAATGC GTTTTCACAA CGGCAATTTG
CCGCTGCATG AAAACGGGAT GCAGATCCAC GCCTGGCATG ACGACACGGT CATTTATAGC
AAGACGTACT ATTCCATCGG CGGCGGCTTT ATCGTTGATG AAGAGCATTT CGGCCAGGAA
GCGACGAATG AGGTTACTGT ACCTTATCCG TTTAAATCGG CGAAAGAAAT GCTGGAGTAT
TGCAACAGTA CCGGCCTTTC ACTCTCCGGC ATGGTGATGC AAAACGAACT GGCGCTGCAT
AGCAAGAAAG AGATTGAAGA GTATTTCGGT CACGTCTGGC AGACCATGCA GGCCTGTATT
GATCGTGGTA TGAATACCGA AGGCGTGCTG CCGGGGCCGC TGCGCGTACC GCGTCGCGCC
TCTGCGCTGC GTCGTATGCT GGTTTCCAGC GATAAGCTTT CCAGCGATCC GATGAACGTC
ATTGACTGGG TGAACATGTT TGCTCTGGCG GTGAACGAAG AGAACGCCGC AGGTGGTCGC
GTCGTGACGG CGCCAACCAA CGGCGCGTGC GGCATCGTGC CTGCGGTACT GGCTTACTAC
GACCATTTTA TTGAGTCTGT CAGCCCGGAT ATTTACACCC GCTACTTCCT GGCGGCAGGC
GCTATTGGCG CGCTGTATAA GATGAACGCG TCTATTTCCG GCGCGGAAGT CGGCTGTCAG
GGCGAAGTCG GGGTCGCCTG TTCGATGGCG GCGGCAGGCC TTGCTGAACT GTTGGGCGCC
AGCCCGGAAC AGGTTTGCGT TGCCGCTGAA ATCGGCATGG AGCATAACCT GGGGCTGACC
TGCGACCCGG TTGCCGGTCA GGTGCAGGTG CCGTGTATCG AGCGTAACGC CATTGCTTCG
GTTAAAGCGA TTAACGCTGC GCGTATGGCC ATGCGTCGAA CCAGCGCGCC GCGCGTCTCG
TTGGATAAAG TCATCGAAAC GATGTACGAG ACCGGAAAAG ACATGAACGC AAAATACCGC
GAAACGTCGC GCGGCGGGTT GGCTATTAAA GTCCAGTGTG ATTAA
 
Protein sequence
MISLFDMFKV GIGPSSSHTV GPMKAGKQFV DDLVEKGLLD NVTRVAVDVY GSLSLTGKGH 
HTDIAIIMGL AGNEPATVDI DSIPGFIRDV ETRERLLLAQ GRHEVDFPKD DGMRFHNGNL
PLHENGMQIH AWHDDTVIYS KTYYSIGGGF IVDEEHFGQE ATNEVTVPYP FKSAKEMLEY
CNSTGLSLSG MVMQNELALH SKKEIEEYFG HVWQTMQACI DRGMNTEGVL PGPLRVPRRA
SALRRMLVSS DKLSSDPMNV IDWVNMFALA VNEENAAGGR VVTAPTNGAC GIVPAVLAYY
DHFIESVSPD IYTRYFLAAG AIGALYKMNA SISGAEVGCQ GEVGVACSMA AAGLAELLGA
SPEQVCVAAE IGMEHNLGLT CDPVAGQVQV PCIERNAIAS VKAINAARMA MRRTSAPRVS
LDKVIETMYE TGKDMNAKYR ETSRGGLAIK VQCD