Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1966 |
Symbol | |
ID | 6483593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1921745 |
End bp | 1923109 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642737333 |
Product | L-serine ammonia-lyase |
Protein accession | YP_002041083 |
Protein GI | 194442772 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTAGCC TATTCGACAT GTTTAAGGTA GGGATTGGTC CCTCCTCTTC CCACACTGTT GGCCCGATGA AGGCCGGTAA ACAGTTCGTC GATGACCTGG TCGAAAAAGG ATTACTGGAT AACGTTACCC GCGTCGCTGT CGATGTCTAC GGCTCGCTGT CGCTGACGGG GAAAGGTCAC CATACCGATA TCGCCATTAT TATGGGCCTG GCGGGTAATG AACCCGCTAC CGTGGATATT GATAGTATCC CCGGTTTTAT TCGCGACGTC GAAACGCGCG AGCGTCTGTT ACTGGCCCAG GGACGTCACG AAGTCGACTT CCCGAAAGAT GACGGAATGC GTTTTCACAA CGGCAATTTG CCGCTGCATG AAAACGGGAT GCAGATCCAC GCCTGGCATG ACGACACGGT CATTTATAGC AAGACGTACT ATTCCATCGG CGGCGGCTTT ATCGTTGATG AAGAGCATTT CGGCCAGGAA GCGACGAATG AGGTTACTGT ACCTTATCCG TTTAAATCGG CGAAAGAAAT GCTGGAGTAT TGCAACAGTA CCGGCCTTTC ACTCTCCGGC ATGGTGATGC AAAACGAACT GGCGCTGCAT AGCAAGAAAG AGATTGAAGA GTATTTCGGT CACGTCTGGC AGACCATGCA GGCCTGTATT GATCGTGGTA TGAATACCGA AGGCGTGCTG CCGGGGCCGC TGCGCGTACC GCGTCGCGCC TCTGCGCTGC GTCGTATGCT GGTTTCCAGC GATAAGCTTT CCAGCGATCC GATGAACGTC ATTGACTGGG TGAACATGTT TGCTCTGGCG GTGAACGAAG AGAACGCCGC AGGTGGTCGC GTCGTGACGG CGCCAACCAA CGGCGCGTGC GGCATCGTGC CTGCGGTACT GGCTTACTAC GACCATTTTA TTGAGTCTGT CAGCCCGGAT ATTTACACCC GCTACTTCCT GGCGGCAGGC GCTATTGGCG CGCTGTATAA GATGAACGCG TCTATTTCCG GCGCGGAAGT CGGCTGTCAG GGCGAAGTCG GGGTCGCCTG TTCGATGGCG GCGGCAGGCC TTGCTGAACT GTTGGGCGCC AGCCCGGAAC AGGTTTGCGT TGCCGCTGAA ATCGGCATGG AGCATAACCT GGGGCTGACC TGCGACCCGG TTGCCGGTCA GGTGCAGGTG CCGTGTATCG AGCGTAACGC CATTGCTTCG GTTAAAGCGA TTAACGCTGC GCGTATGGCC ATGCGTCGAA CCAGCGCGCC GCGCGTCTCG TTGGATAAAG TCATCGAAAC GATGTACGAG ACCGGAAAAG ACATGAACGC AAAATACCGC GAAACGTCGC GCGGCGGGTT GGCTATTAAA GTCCAGTGTG ATTAA
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Protein sequence | MISLFDMFKV GIGPSSSHTV GPMKAGKQFV DDLVEKGLLD NVTRVAVDVY GSLSLTGKGH HTDIAIIMGL AGNEPATVDI DSIPGFIRDV ETRERLLLAQ GRHEVDFPKD DGMRFHNGNL PLHENGMQIH AWHDDTVIYS KTYYSIGGGF IVDEEHFGQE ATNEVTVPYP FKSAKEMLEY CNSTGLSLSG MVMQNELALH SKKEIEEYFG HVWQTMQACI DRGMNTEGVL PGPLRVPRRA SALRRMLVSS DKLSSDPMNV IDWVNMFALA VNEENAAGGR VVTAPTNGAC GIVPAVLAYY DHFIESVSPD IYTRYFLAAG AIGALYKMNA SISGAEVGCQ GEVGVACSMA AAGLAELLGA SPEQVCVAAE IGMEHNLGLT CDPVAGQVQV PCIERNAIAS VKAINAARMA MRRTSAPRVS LDKVIETMYE TGKDMNAKYR ETSRGGLAIK VQCD
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