Gene SNSL254_A1965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1965 
Symbol 
ID6484502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1920903 
End bp1921481 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content59% 
IMG OID642737332 
Producthypothetical protein 
Protein accessionYP_002041082 
Protein GI194443608 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.881089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATACCA GCCGTCTGAC GCTCAATCAT TTCTTATCGC GCTTTCAGCT TTTGCGCCCG 
CAGATGACTC ATGAAACGTT AAATCAACGT CAGGCCGCCG TACTGATCCC TGTGGTTCGC
CGCCCCCAAC CGGGGCTGCT GTTGACCCAG CGGGCTATTC ATTTGCGCAA ACACGCCGGA
CAGGTCGCCT TTCCCGGCGG GGCCGTGGAC AGTACCGATG CTTCGCTTAT CGCCGCAGCG
CTTCGCGAAG CGCAGGAGGA AGTCGCCATC CCGCCGCAAG CCGTGGAAGT GATTGGCGTT
TTACCGCCGG TAGACAGCGT GACCGGTTTT CAGGTCACCC CGGTGGTCGG CATTATTCCG
CCAAATCTCC CCTGGCGCGC CAGTGAAGAC GAAGTGTCTG CGGTGTTTGA AATGCCGCTG
GCGCAAGCGT TGCAACTGGG TCGATATCAT CCGCTTGATG TTTACCGTCG CGGCAATTCG
CACCGCGTAT GGCTCTCCTG GTATGAGCAT TATTTCGTCT GGGGCATGAC CGCAAACATT
CTTCGTGAGC TGGCGCTGCA AATCGGCGTA AAGCCCTGA
 
Protein sequence
MDTSRLTLNH FLSRFQLLRP QMTHETLNQR QAAVLIPVVR RPQPGLLLTQ RAIHLRKHAG 
QVAFPGGAVD STDASLIAAA LREAQEEVAI PPQAVEVIGV LPPVDSVTGF QVTPVVGIIP
PNLPWRASED EVSAVFEMPL AQALQLGRYH PLDVYRRGNS HRVWLSWYEH YFVWGMTANI
LRELALQIGV KP