Gene SNSL254_A1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1960 
Symbol 
ID6486719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1916130 
End bp1916825 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content60% 
IMG OID642737327 
Productputative M22 peptidase homolog YeaZ 
Protein accessionYP_002041077 
Protein GI194446003 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.608794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones92 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATTC TGGCTATCGA TACCGCCACA GAGGCCTGTT CTGTCGCCCT GTGGAACAAC 
GGTACTATCA ATGCTCACTT TGAGCTTTGT CCACGAGAAC ACACTCAACG TATCCTGCCC
ATGGTGCAGG AGATTCTGGC CGCCAGCGGC GCCTCGCTCA ATGAGATAGA TGCGCTGGCG
TTTGGGCGCG GTCCGGGCAG CTTTACCGGC GTGCGTATCG GCATTGGGAT TGCGCAAGGG
CTGGCGTTAG GGGCAAATCT GCCGATGATC GGTGTTTCGA CGCTTGCCAC GATGGCGCAG
GGCGCATGGC GTAAAACTGG CGCGACCCGC GTACTCGCCG CGATTGACGC GCGGATGGGC
GAAGTGTACT GGGCGGAATA CCAGCGTGAT GCGCAGGGCG TCTGGCAGGG TGAAGAGACG
GAAGCGGTGC TGAAACCGGA ACGGGTCGGC GAGCGGTTGA AACAGCTTTC CGGCGAGTGG
GCGACCGTAG GAACGGGTTG GTCCGCGTGG CCCGATCTGG CGAAGGAATG CGGCCTGACG
CTTCATGATG GGGAGGTGTC GCTCCCGGCA GCGGAAGATA TGTTGCCCAT CGCCAGTCAA
AAGCTGGCGG CAGGAGAGAC CGTTGCCGTG GAACATGCCG AGCCGGTTTA TTTGCGTAAC
GAAGTGGCGT GGAAGAAACT TCCCGGCAAA GAATGA
 
Protein sequence
MRILAIDTAT EACSVALWNN GTINAHFELC PREHTQRILP MVQEILAASG ASLNEIDALA 
FGRGPGSFTG VRIGIGIAQG LALGANLPMI GVSTLATMAQ GAWRKTGATR VLAAIDARMG
EVYWAEYQRD AQGVWQGEET EAVLKPERVG ERLKQLSGEW ATVGTGWSAW PDLAKECGLT
LHDGEVSLPA AEDMLPIASQ KLAAGETVAV EHAEPVYLRN EVAWKKLPGK E