Gene SNSL254_A1951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1951 
Symbol 
ID6484585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1909324 
End bp1909983 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content53% 
IMG OID642737319 
Producthypothetical protein 
Protein accessionYP_002041069 
Protein GI194445087 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.391481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCAAC ATCGTAACTG GCAAGGCGCC TTGCTTGATT ACCCGGTAAG TAAAGTGGTC 
TGCGTGGGCA GTAATTACGC AAATCACATC AAGGAGATGG GCAGCGCGAC GCCGGAAGAA
CCCGTGCTTT TTATCAAGCC GGAAACCGCA TTGTGTGATA TTCGCCAGCC GCTGGCGATT
CCGGCGGATA TGGGGGCTGT TCATCATGAA GTTGAGCTTG CTGTGCTGAT TGGCGCAACG
CTCCGCCAGG CGACCGAAGA TCATGTACGT AAAGCGATAG CCGGTTATGG CGTGGCGCTT
GATTTAACCC TGCGCGATAT TCAAGGGAAA ATGAAAAAGG CCGGACAGCC CTGGGAAAAA
GCCAAAGGTT TTGATAACGC ATGTCCGATT TCAGGCTTCA TCCCTGTCGC GGCCTTCTGC
GGCGATCCGC AAAATACGGT TATCGGACTT AACGTTAATG GCGAGGTTCG CCAGCAAGGG
TCGACCGCGG ATATGATTCA TCCTATTGTG CCCCTTATCG CCTATATGAG CCGCTATTTT
ACGCTCAAAG CCGGGGACGT GGTGCTAACC GGCACGCCGG CAGGCGTGGG GCCATTATTA
AGCGGCGATG AGCTGGACAT TCGTTTTAAT GGCGAAACGT TGTCTACCCG CGTTCTGTAA
 
Protein sequence
MYQHRNWQGA LLDYPVSKVV CVGSNYANHI KEMGSATPEE PVLFIKPETA LCDIRQPLAI 
PADMGAVHHE VELAVLIGAT LRQATEDHVR KAIAGYGVAL DLTLRDIQGK MKKAGQPWEK
AKGFDNACPI SGFIPVAAFC GDPQNTVIGL NVNGEVRQQG STADMIHPIV PLIAYMSRYF
TLKAGDVVLT GTPAGVGPLL SGDELDIRFN GETLSTRVL