Gene SNSL254_A1950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1950 
Symbol 
ID6486450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp1908785 
End bp1909246 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content49% 
IMG OID642737318 
Producthypothetical protein 
Protein accessionYP_002041068 
Protein GI194444573 
COG category[S] Function unknown 
COG ID[COG2983] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.171118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGATA CTTTAATGAG CGATACACCT TTCTGGCAAC GTAAAACCCT GGATGAAATG 
ACCGATGCCG AGTGGGAGTC GCTGTGCGAT GGCTGCGGTC AATGCTGCCT GCATAAGCTG 
ATGGATGAAG ATACAGATGA AATCTACTTC ACCAACGTGG CGTGCAGGCA ATTAAATATC 
AAAACGTGCC AGTGCCGTCA TTATGAACGC CGTTTTGAAT TTGAACCCGA CTGTATCAAA 
CTCACTCGCG AAAACTTGCC AGACTTTGAA TGGTTGCCGA TGACCTGCGC CTACCGTTTG 
TTGGCGGAAG GTAAGCCCTT GCCGACGTGG CATCCGCTGC TGACTGGATC GAAAGCCGCT 
ATGCATGGCG AGCGAATTTC TGTCCGTCAT ATCGCGGTTA AAGAATCCGA AGTACGGGAC 
TGGCAGGATC ATATTTTAAA TAAACCGTCG TGGGCAGAAT AA
 
Protein sequence
MADTLMSDTP FWQRKTLDEM TDAEWESLCD GCGQCCLHKL MDEDTDEIYF TNVACRQLNI 
KTCQCRHYER RFEFEPDCIK LTRENLPDFE WLPMTCAYRL LAEGKPLPTW HPLLTGSKAA 
MHGERISVRH IAVKESEVRD WQDHILNKPS WAE