Gene SNSL254_A1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1940 
SymboldadX 
ID6483189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1899969 
End bp1901039 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content57% 
IMG OID642737308 
Productalanine racemase 
Protein accessionYP_002041058 
Protein GI194442850 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0787] Alanine racemase 
TIGRFAM ID[TIGR00492] alanine racemase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.277232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCC CTATACAGGC CAGCCTTGAT TTACAGGTAA TGAAACAAAA TTTGGCTATT 
GTGCGCCGGG CGGCCCCAGA GGCGCGCGTC TGGTCGGTAG TGAAAGCCAA CGCCTACGGC
CACGGTATTG AACGCGTCTG GAGCGCGCTG GGCGCCACAG ATGGTTTCGC TATGCTCAAC
CTTGAAGAGG CGATTACCCT GCGTGAGCGC GGGTGGAAAG GGCCGATATT GATGCTGGAG
GGGTTTTTCC ATGCGCAAGA CCTGGAGGCG TATGACACTT ATCGGCTGAC CACCTGCATC
CACAGTAACT GGCAGTTGAA AGCGCTGCAA AATGCGCGGC TTAACGCGCC GCTGGATATC
TATGTCAAAG TCAACAGCGG CATGAACCGA CTCGGTTTTC AGCCTGAGCG GGCGCAGACC
GTCTGGCAGC AATTGTGGGC AATGCGCAAT GTCGGTGAAA TGACCCTGAT GTCACATTTC
GCTCAGGCCG ATCATCCGGA AGGTATCGGG GAGGCGATGA GGCGTATTGC GCTGGCGACG
GAAGGCCTGC AGTGTGCATA CTCGTTATCA AATTCGGCAG CGACGCTGTG GCATCCCCAG
GCGCATTATG ACTGGGTCAG GCCAGGCATT ATTTTGTATG GCGCGTCGCC GTCAGGACAG
TGGCGGGATA TTGCCGATAC CGGACTAAAA CCCGTGATGA CGCTGAGTAG CGAAATTATT
GGCGTGCAGA CGTTGAGCGT GGGTGAAAGG GTAGGCTATG GCGGAAGGTA TTCTGTGACT
CAGGAACAAC GCATTGGCAT CGTCGCGGCG GGTTATGCCG ATGGCTATCC ACGCCATGCG
CCGACCGGGA CGCCTGTGCT GGTGGACGGT ATCCGTACCA GAACAGTAGG CACCGTTTCA
ATGGATATGC TGGCGGTGGA TTTGACGCCG TGTCCGCAGG CGGGAATCGG CACGCCGGTT
GAATTATGGG GCAAAGAAAT TAAGGTCGAT GATGTCGCCT CTGCGGCAGG CACGCTGGGC
TATGAGCTAC TGTGCGCCGT AGCGCCGCGC GTGCCGTTTG TGACAACGTA A
 
Protein sequence
MTRPIQASLD LQVMKQNLAI VRRAAPEARV WSVVKANAYG HGIERVWSAL GATDGFAMLN 
LEEAITLRER GWKGPILMLE GFFHAQDLEA YDTYRLTTCI HSNWQLKALQ NARLNAPLDI
YVKVNSGMNR LGFQPERAQT VWQQLWAMRN VGEMTLMSHF AQADHPEGIG EAMRRIALAT
EGLQCAYSLS NSAATLWHPQ AHYDWVRPGI ILYGASPSGQ WRDIADTGLK PVMTLSSEII
GVQTLSVGER VGYGGRYSVT QEQRIGIVAA GYADGYPRHA PTGTPVLVDG IRTRTVGTVS
MDMLAVDLTP CPQAGIGTPV ELWGKEIKVD DVASAAGTLG YELLCAVAPR VPFVTT