Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1939 |
Symbol | |
ID | 6482397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1898174 |
End bp | 1899907 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642737307 |
Product | potassium/proton antiporter |
Protein accession | YP_002041057 |
Protein GI | 194443047 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.058645 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGATGCTG CAACAATTAT TAGTCTATTT ATTTTAGGTT CCATCCTTGT AACCAGCAGT ATCCTGTTAA GTTCATTCTC ATCGCGACTG GGCATCCCGA TTCTGGTCAT TTTCCTCGCC ATTGGGATGT TAGCGGGTGT GGATGGCATT GGCGGTATTC CTTTCGATAA TTATCCTTTC GCTTATATGG TCAGTAACCT GGCGCTGGCG ATTATTTTAC TCGATGGCGG AATGCGCACC CAGGCCAGCT CTTTCCGGGT AGCGCTGGGC CCCGCGCTGT CGCTGGCGAC GCTCGGCGTA CTGATCACGT CGGGGTTAAC AGGTATGATG GCCGCCTGGC TGTTTCATCT GGATCTTATC GAAGGTCTGC TCATTGGCGC GATAGTCGGT TCCACTGACG CCGCAGCGGT CTTTTCTCTG CTTGGCGGCA AAGGGCTAAA CGAACGTGTA GGCTCCACGC TGGAGATCGA ATCGGGAAGT AACGACCCGA TGGCCGTTTT TCTGACCATT ACATTAATTG AGATGATCCA GAAACACGAA ACCGGTCTGG ACTGGATGTT TGCCGTCCAT ATTATCCAGC AGTTCGGTCT CGGTATTGTT TTTGGCCTGG GCGGCGGTTA CCTGCTACAG CAGATGATCA ACCGTATTTC ACTGCCCAGC GGCCTGTATC CGATGCTGGC GCTCAGCGGC GGTATTCTGA TTTTTGCTTT GACGACCGCG CTTGAAGGCA GCGGCATTCT CGCGGTCTAT CTGTGCGGAT TCCTGTTAGG AAACCGTCCG ATTCGCAACC GTTACGGCAT CCTGCAAAAC TTTGACGGAC TGGCCTGGCT GGCGCAGATC GCGATGTTCC TGGTCCTGGG GCTGTTGGTG ACGCCTTCCG ATCTGTGGCC GATTGCCGTC CCTGCGCTTA TTCTCTCTAT CTGGATGATT TTCTTCGCCC GCCCGCTGTC GGTGTTTACC GGCCTGCTGC CATTTCGCGG CTTCAATCTT CGGGAGCGCA TTTTCATCAG TTGGGTCGGA CTGCGCGGTG CGGTGCCGAT TATTCTCGCC GTTTTCCCGA TGATGGCCGG GCTTGAAAAC GCTCGCCTGT TCTTTAATGT CGCTTTCTTT GTGGTACTGG TGTCGCTGCT CCTGCAGGGA ACATCGCTGT CATGGGCGGC GAAGAGAGCC AAAGTGGTCG TGCCTCCGGT TGGCTGGCCA GTATCGCGCG TGGGGCTTGA CATCCATCCT GATAATCCGT GGGAGCAATT CATCTATCAG TTGAGCGCGG ACAAATGGTG CGTCGGCGCG GCGTTGCGCG ACCTGCATAT GCCGAACGAA ACCCGCATTG CCGCGCTATT TCGCAATAAT GAACTGTTTC ACCCCACGGG TAGCACTCGC CTGCAGGAAG GCGACGTACT CTGCGTGATT GGCCGGGAGC GCGATCTGCC AGCGCTGGGC AAATTGTTTA GCCAGTCGCC GCCGGTTTCG TTAGATCAGC GTTTCTTTGG CGATTTTATC CTCGAAGCGA ATGCGAAATT CGCCGACGTG GCGCTTATCT ACGGGCTGGA AGAAGGAACG GAATACCGGG ATAAACAACA AACTCTGGGT GAAATCATAC AGCAGCTGCT GGGCGCTGCG CCGGTCGTTG GCGATCAGGT GGAGTTTGGC GGCATGATTT GGACGGTAGC TGAAAAAGAA GATAACGTGG TACGCAAGAT TGGGGTACGC GTCGCCGAAG ACGAAGCAGA ATAA
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Protein sequence | MDAATIISLF ILGSILVTSS ILLSSFSSRL GIPILVIFLA IGMLAGVDGI GGIPFDNYPF AYMVSNLALA IILLDGGMRT QASSFRVALG PALSLATLGV LITSGLTGMM AAWLFHLDLI EGLLIGAIVG STDAAAVFSL LGGKGLNERV GSTLEIESGS NDPMAVFLTI TLIEMIQKHE TGLDWMFAVH IIQQFGLGIV FGLGGGYLLQ QMINRISLPS GLYPMLALSG GILIFALTTA LEGSGILAVY LCGFLLGNRP IRNRYGILQN FDGLAWLAQI AMFLVLGLLV TPSDLWPIAV PALILSIWMI FFARPLSVFT GLLPFRGFNL RERIFISWVG LRGAVPIILA VFPMMAGLEN ARLFFNVAFF VVLVSLLLQG TSLSWAAKRA KVVVPPVGWP VSRVGLDIHP DNPWEQFIYQ LSADKWCVGA ALRDLHMPNE TRIAALFRNN ELFHPTGSTR LQEGDVLCVI GRERDLPALG KLFSQSPPVS LDQRFFGDFI LEANAKFADV ALIYGLEEGT EYRDKQQTLG EIIQQLLGAA PVVGDQVEFG GMIWTVAEKE DNVVRKIGVR VAEDEAE
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