| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1938 |
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| Symbol | ldcA |
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| ID | 6483701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 1897163 |
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| End bp | 1898077 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642737306 |
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| Product | L,D-carboxypeptidase A |
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| Protein accession | YP_002041056 |
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| Protein GI | 194442275 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.36468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 88 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTGT TTCATTTAAT CGCCCCCTCG GGCTACTGTA TTAACCAACA GGCCGCGTTA
CGCGGCGTTC AGCGCCTGAC TGACGCGGGT CATCAGGTGG AGAATGACGA GGTGATTCGC
CGCCGCTATC AGCGTTTTGC CGGTACGGAC ACGGAACGGC TGGCCGATGT TAATTCGCTG
GCCTCGCTAA CGTCGCCGGA TACAATCGTC ATGCCGGTTC GCGGCGGCTA TGGCGCCAGC
CGCTTGTTGG ATCGTATCGA CTGGCAGGCG CTCGCCTCCC GGCAACAGCG CGATCCCTTA
CTGATTTGCG GTCATAGCGA TTTTACGGCG ATTCAGGCTG GACTCCTGGC GCAGGCCAAT
GTCATCACCT TTAGCGGTCC TATGCTGGCG GCAAATTTTG GCGCCGAAAC GCTGAATACG
TTCACCGAGC AACATTTCTG GCTGGCGCTA CGCAAGGCGC AATTTACCGT AGAGTGGCAA
GGTGACGGCC CTCAGTGCGA CGTACAAGGC ACCTTATGGG GCGGAAATCT GGCGATGTTG
ATTTCCCTTA TCGGTACGCC CTGGATGCCG ACTATCGATA AAGGAATTTT AGTGCTGGAA
GATGTCAATG AGCATCCTTT CCGGGTGGAG CGTATGCTTT TGCAACTGGA GTACGCCGGA
ATTTTAAACC GCCAGAGCGC CATCGTTCTC GGCAGCTTTA GCGGCGCGGC GCCCAACGAG
TATGACGCCG GTTATTCTCT GGAGAGCGTC TACGCGTTTT TACGTTCCCG TCTGTCCGTT
CCGCTGATTA CCGGTCTCGA CTTCGGGCAT GAACAGCGTA CGGTGACGCT CCCTATCGGG
GCAAACGCGA CGCTTAAAAA TACGCGCCAG GGGACTCAAC TCACTTTATC TGGTCATCCT
ACGCTGCAAT TGTAA
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| Protein sequence | MSLFHLIAPS GYCINQQAAL RGVQRLTDAG HQVENDEVIR RRYQRFAGTD TERLADVNSL
ASLTSPDTIV MPVRGGYGAS RLLDRIDWQA LASRQQRDPL LICGHSDFTA IQAGLLAQAN
VITFSGPMLA ANFGAETLNT FTEQHFWLAL RKAQFTVEWQ GDGPQCDVQG TLWGGNLAML
ISLIGTPWMP TIDKGILVLE DVNEHPFRVE RMLLQLEYAG ILNRQSAIVL GSFSGAAPNE
YDAGYSLESV YAFLRSRLSV PLITGLDFGH EQRTVTLPIG ANATLKNTRQ GTQLTLSGHP
TLQL
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