Gene SNSL254_A1934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1934 
SymboltreA 
ID6486052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1893435 
End bp1895147 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content56% 
IMG OID642737303 
Producttrehalase 
Protein accessionYP_002041053 
Protein GI194444918 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1626] Neutral trehalase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.489704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACCCC CAGAGATTCG CCGTTCTGTT CTACTGCAGA AAGCCATAAA ACTGGCGCTG 
GCAGGGACGC TGCTGACGTT TGCATCGTTT TCGGCGACTG CCGCAGACCC GTCTTCCGAC
ACTGAAACTC CGCAGCCGCC GGATATTTTG CTTGGCCCGC TCTTTAATGA TGTCCAGAAT
GCAAAACTCT TCCCCGATCA GAAAACCTTT GCTGACGCCA TACCTAATAG CGATCCGCTC
ATGATTCTTG CGGATTATCG TATGCAGCGG AACCAGTCCG GCTTCGATTT GCGTCATTTT
GTTGATGTTA ACTTCACCCT GCCGAAAGCG GGTGAAAAAT ATGTCCCGCC TGCCGGGCAG
TCATTGCGTG AACATATTGA TGGCCTGTGG CCGGTGCTGA CCCGTTCAAC TAAAAACGTC
GAAAAGTGGG ACTCGCTCTT GCCGTTGCCT GAATCCTATG TCGTACCGGG TGGGCGATTC
AGAGAGATTT ACTACTGGGA CAGCTATTTT ACGATGCTGG GGCTGGCAGA GAGCGAGCAC
TGGGATAAGG TGGCGGATAT GGTGGCGAAC TTTGGTTACG AAATTGACGC CTGGGGGCAT
ATTCCTAACG GCAACCGTAC CTACTATCTG AGTCGTTCGC AGCCGCCTTT CTTTGCGTTT
ATGGTTGAGT TACTGGCGCA ACATGAAGGT GACGATGCGC TGAAAGAATA CCTGCCGCAA
CTGCAAAAAG AGTACGCCTA CTGGATGGAA GGCGTTGAGA CATTGCAGCC AGGGCAACAA
AACCAACGCG TCGTCAAACT GGAGGACGGC AGCGTTCTCA ACCGCTACTG GGACGATCGG
GATACGCCCC GCCCTGAATC CTGGGTTGAA GATATCGCTA CCGCCAAAAG CAACCCCAAC
CGCCCGGCAA CGGAGATCTA TCGGGACCTC CGCTCTGCCG CCGCCTCCGG CTGGGATTTC
AGTTCCCGCT GGATGGATAA TCCGCAGCAG CTCAGTACCA TCCGTACCAC CACGATTGTC
CCTGTCGATC TTAACGCTCT GCTGTATCAG CTGGAGAAAA CCCTCGCCCG CGCCAGCGCT
GCGGCGGGCG ATCGGGCCGA AGCCTCGCAA TATGACGCGC TGGCCAACGC GCGGCAAAAA
GCCATTGAAA TGCATCTGTG GAATAACAAA GAGGGTTGGT ATGCCGACTA CGATCTGAAG
AACAATAAAA TCCGTGACCA ACTCACCGCT GCCGCACTGT TCCCGCTCTA TGTAAACGCC
GCCGCGAAAG ATCGCGCCGC GAAAGTGGCG GCGGCGGCCC AGGCGCATCT GCTACAGCCT
GGCGGGCTGG CTACCACCTC GGTTAAAAGC GGACAGCAGT GGGATGCGCC AAACGGCTGG
GCGCCGTTAC AATGGGTCGC TGCCGAAGGA TTGCAAAATT ATGGGCAGGA TGACGTGGCA
ATGGAAGTCA CCTGGCGCTT TTTAACCAAT GTGCAGCACA CCTACGATCG CGAGAAAAAA
CTGGTCGAAA AATATGACGT CAGCAGTACC GGAACCGGCG GTGGCGGCGG CGAATATCCC
CTTCAGGACG GCTTTGGCTG GACCAACGGC GTGACGCTGA AAATGCTCGA TCTGATTTGT
CCGCAGGAAA AACCGTGTGA TAGCGTACCG TCTACTCGTC CGGCCTCGTT AAGCGCAACG
CCGACAAAAA CGCCGTCTGC AGCGACGCAG TAA
 
Protein sequence
MIPPEIRRSV LLQKAIKLAL AGTLLTFASF SATAADPSSD TETPQPPDIL LGPLFNDVQN 
AKLFPDQKTF ADAIPNSDPL MILADYRMQR NQSGFDLRHF VDVNFTLPKA GEKYVPPAGQ
SLREHIDGLW PVLTRSTKNV EKWDSLLPLP ESYVVPGGRF REIYYWDSYF TMLGLAESEH
WDKVADMVAN FGYEIDAWGH IPNGNRTYYL SRSQPPFFAF MVELLAQHEG DDALKEYLPQ
LQKEYAYWME GVETLQPGQQ NQRVVKLEDG SVLNRYWDDR DTPRPESWVE DIATAKSNPN
RPATEIYRDL RSAAASGWDF SSRWMDNPQQ LSTIRTTTIV PVDLNALLYQ LEKTLARASA
AAGDRAEASQ YDALANARQK AIEMHLWNNK EGWYADYDLK NNKIRDQLTA AALFPLYVNA
AAKDRAAKVA AAAQAHLLQP GGLATTSVKS GQQWDAPNGW APLQWVAAEG LQNYGQDDVA
MEVTWRFLTN VQHTYDREKK LVEKYDVSST GTGGGGGEYP LQDGFGWTNG VTLKMLDLIC
PQEKPCDSVP STRPASLSAT PTKTPSAATQ