Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1931 |
Symbol | cydB |
ID | 6483924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1890314 |
End bp | 1891450 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642737300 |
Product | cytochrome D ubiquinol oxidase subunit II |
Protein accession | YP_002041050 |
Protein GI | 194444685 |
COG category | [C] Energy production and conversion |
COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGGATT ATGAAACGTT GCGGTTCATT TGGTGGCTGC TGATCGGCGT CATCCTGGTG GCATTTATGG TAACTGACGG GTTTGATATG GGTGTCGGTT GCCTGCTCCC GCTGATAGCG CGCAACGATG ACGAACGCCG GGTATTGATC AATAGCGTGG GCGCCCACTG GGAAGGAAAC CAGGTATGGT TGATTCTCGC GGGCGGGGCA TTATTCGCCG CCTGGCCACG GGTCTATGCC GCCGCGTTTT CCGGTTTTTA TGTGGCGATG ATCCTGGTGC TGTGTGCCCT CTTCTTTCGC CCGCTGGCCT TTGATTATCG GGGTAAAATC GCCAATGCCC GCTGGCGCGC GCTGTGGGAT ACCGGTCTGG TTATCGGCAG CCTGGTTCCC CCCGTTGTAT TCGGCATCGC GTTCGGCAAC CTGTTTTTAG GCGTGCCGTT TGCCTTCACG CCGCAGCTTC ATGTTGACTA TTTTGGTACC TTCTGGCAGT TACTCTCGCC CTTTGCGCTA CTGTGTGGAT TATTGAGTCT GTCGTTGGTG ATTATGCAAG GAGGCGTCTG GTTACAGTTG AAAACGGAGG GCGTTATTCG TCAACGGGCT CTGTCGGCCA CCCGCCACAG CGCGCTGCTG ATCGTGATCT GCTTCCTGCT GGCCGGTTAC TGGCTGTGGG CCGGCGTTGA TGGCTTTGTC TTACTCACGC AGGATGCCAA CGGTCCTTCC AATCCGCTCT TAAAAGGCGT GGCGATACTC CCTGGCGCAT GGATGAACCA CTTTATACGC TCGCCGCTAC TGCTCATCAT CCCGTTGCTC GGTATGATCC TGCCGATTCT GGCTTTCTAT GCCTGCCTTC GCGGTCAGAC TATTCGTGGA TTTCTGTTCG CTTCCCTGAC CCAGGCCTGC GTCATCTTTA CCGCCGGCAT AACGCTATTT CCTTTTGTGA TGCCGTCGAG TGTTAGTCCT CTCTCCAGCC TGACGGTGTG GGACAGCACC TCCAGCCAGA TGACGCTCGA AATCATGCTG GTGATTGTGC TGATTTTTCT GCCGATCGTA CTGCTCTATA CGCTATGGAG CTATTACAAA ATGTTGGGGC GTATCAACCT GGAGACCCTC CGCCGCAACG ATCATGAACT TTATTAG
|
Protein sequence | MLDYETLRFI WWLLIGVILV AFMVTDGFDM GVGCLLPLIA RNDDERRVLI NSVGAHWEGN QVWLILAGGA LFAAWPRVYA AAFSGFYVAM ILVLCALFFR PLAFDYRGKI ANARWRALWD TGLVIGSLVP PVVFGIAFGN LFLGVPFAFT PQLHVDYFGT FWQLLSPFAL LCGLLSLSLV IMQGGVWLQL KTEGVIRQRA LSATRHSALL IVICFLLAGY WLWAGVDGFV LLTQDANGPS NPLLKGVAIL PGAWMNHFIR SPLLLIIPLL GMILPILAFY ACLRGQTIRG FLFASLTQAC VIFTAGITLF PFVMPSSVSP LSSLTVWDST SSQMTLEIML VIVLIFLPIV LLYTLWSYYK MLGRINLETL RRNDHELY
|
| |