Gene SNSL254_A1926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1926 
SymbolcybH 
ID6485440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1886120 
End bp1886851 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content55% 
IMG OID642737295 
Producthydrogenase 1 b-type cytochrome subunit 
Protein accessionYP_002041045 
Protein GI194446611 
COG category[C] Energy production and conversion 
COG ID[COG1969] Ni,Fe-hydrogenase I cytochrome b subunit 
TIGRFAM ID[TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.953972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGGAA AGCTATCTCC ACGCGTCGGG GAGGCGCGTG ATACTGCCGT CAGCCACTAT 
GTGTTTGAAG CGCCGGTACG CCTGTGGCAC TGGCTAACGG TGGCCTGCAT GTTGGTACTG
ATGGTAACAG GCTACTTCAT TGGCCGGCCC TTGCCGTCTG TGAGTGGCGA GGCGACCTAT
CTGTTTTATA TGGGCTATAT CCGGCTGATC CACTTTGCCG CCGCGATGAT CTTTACCGTG
TTACTGCTGG GGCGAATTTA TTGGGCCTGT GTCGGCAACC GCTATTCGCG AGAGCTGTTT
ATCGTCCCGG TCTGGCGTCG CAGTTGGTGG CAAGGCGCTT TCTCCGTGGT CCGCTGGTAT
CTGTTTCTGG AGAAAAAACC GGGGAGCGAC ATCGGACATA ACCCTGTCGC ACAGGCCGCG
ATGTTCGGCT ATTTCCTGTT GTCGGTATTT ATGATCCTCA CCGGTTTCGC TCTGTTTGGC
GAGCATAGCC AGTACGCGAT CTTTGCGCCG TTCCGCTATG TGGTTGAATT TTTCTACTGG
ACCGGCGGCA ACTCCATCGA TATTCACAGT TGGCACCGAC TGGGCATGTG GCTGATCGCC
GCCTTCATCG TCGGGCACGT TTACCTCGCT ATCCGGGAAG ACATTATGTC CGACGATACG
GTGATATCCA CCATGATCAA TGGCTATCGC AGCCACAAAT TCCCCAAACC GCACGACAAG
GAGCCCTCAT GA
 
Protein sequence
MTGKLSPRVG EARDTAVSHY VFEAPVRLWH WLTVACMLVL MVTGYFIGRP LPSVSGEATY 
LFYMGYIRLI HFAAAMIFTV LLLGRIYWAC VGNRYSRELF IVPVWRRSWW QGAFSVVRWY
LFLEKKPGSD IGHNPVAQAA MFGYFLLSVF MILTGFALFG EHSQYAIFAP FRYVVEFFYW
TGGNSIDIHS WHRLGMWLIA AFIVGHVYLA IREDIMSDDT VISTMINGYR SHKFPKPHDK
EPS