| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1910 |
|---|
| Symbol | lolB |
|---|
| ID | 6486742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 1872203 |
|---|
| End bp | 1872826 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642737279 |
|---|
| Product | outer membrane lipoprotein LolB |
|---|
| Protein accession | YP_002041029 |
|---|
| Protein GI | 194445027 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
|---|
| TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0427332 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 0.728098 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTGC CCGATTTTCG CCTGATTCGT CTACTGCCGT TAGCAAGCCT GGTTCTCACC
GCCTGTACGC TTCCTGGGCA TAAAGGCCCG GGCAAGAGCC CGGATTCCCC TCAGTGGCGC
CAGCATCAGC AAGAGGTGCG TCATCTGAAT CAATACCAGA CGCGCGGCGC CTTTGCTTAC
ATCTCAGATG ATCAGAAAGT CTATGCGCGT TTCTTCTGGC AACAGACCGG ACAGGATCGC
TATCGCCTGC TGCTCACCAA TCCGCTGGGC AGCACCGAGC TGGAGCTTAA CGCCCAGCCG
GGCAACGTTC AGTTGGTGGA TAACAAAGGC CAGCGTTATA CCGCCGATGA CGCCGAAGAG
ATGATCGGCA AACTCACCGG GATGCCGATT CCGTTAAACA GCCTGCGGCA GTGGATCCTC
GGTCTGCCTG GCGATGCCAC CGACTACAAA CTGGACGACC AGTATCGCCT GAGCGAAGTG
AACTATCGCC AGGATGGTAA AAACTGGAAA GTGGTTTACG GTGGCTATGA CAGCAAAACG
CAGCCTGCCA TGCCTGCCAA TATGGAGCTT TCAGACGGCA GTCAGCGCAT TAAGCTGAAA
ATGGATAACT GGATTGTGAA ATGA
|
|---|
| Protein sequence | MTLPDFRLIR LLPLASLVLT ACTLPGHKGP GKSPDSPQWR QHQQEVRHLN QYQTRGAFAY
ISDDQKVYAR FFWQQTGQDR YRLLLTNPLG STELELNAQP GNVQLVDNKG QRYTADDAEE
MIGKLTGMPI PLNSLRQWIL GLPGDATDYK LDDQYRLSEV NYRQDGKNWK VVYGGYDSKT
QPAMPANMEL SDGSQRIKLK MDNWIVK
|
|---|
| |