Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1897 |
Symbol | |
ID | 6486104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1860461 |
End bp | 1862257 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642737266 |
Product | nitrate/nitrite sensor protein NarX |
Protein accession | YP_002041016 |
Protein GI | 194446585 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3850] Signal transduction histidine kinase, nitrate/nitrite-specific |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 0.149462 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAAAC GGTGTTTCTC TCCTCTTACG CTGGTTAACC AACTGGCGCT GATTGTCATG CTCTCTACCG CTATCGGCGT GGCGGGGATG GCGGTTTCCG GCTGGCTGGT TCAGGGCGTG CAGGGTAGCG CTCATGCGAT TAATAAAGCG GGCTCATTGC GTATGCAAAG CTATCGACTA CTGGCCGCTG TCCCGCTGGA TGCTAAAGAT CAAAAGCTGC TGGATGAGAT GGAGCAAACG GCATTCAGCC CGGAACTGAC CCGCGCCGCT GAGCGAGACG GGCAGCAAAA GCAGCTTAAA GCGTTGCAGG ATTACTGGCA TAACGAACTC TCGCCAGGAC TACAGCACGC GCAAAACGCG CACGCGGTCG CAGAAGATGT CACGCGCTTT GTGGCGGGCC TGGATCGCCT GGTGACGTCG TTCGACCATA CTACTGAATT GCGTATCGAA CGCGTGGTAT TAGTTCACCG GGTAATGGCG ATCTTTATGG CGCTATTGCT GGTATTTACG ATTATCTGGC TACGTGTTCG CCTTTTGCAG CCCTGGAAAC AGTTATTATC AATGGCGCGC GCCGTCAGTC AGCGCGACTT TACCCAACGT GCCAATATCA GTGGACGCAA TGAGATGGCC GCGTTGGGTT CTGCGCTCAA TAATATGTCT GAAGAGCTGG CCGAAAGTTA TGCGGTACTG GAACAGCGCG TACAGGAAAA AACAGCCGGT CTGGAACATA AAAACCAGAT TCTCTCGTTT TTGTGGCAAG CCAACCGCCG ACTGCATTCA CAGGCTCCGC TATGTGAACG TCTTTCACCG GTACTGAATG GCCTGCAAAA TTTAACCCAG TTGCATGATA TTGAGCTGCG AGTCTATGAC CTGGAAGATG AAGATAATCA TCAGGAATTT ACCTGTCAGT CGGACATCAG TTGCGATGAT AAAGGCTGCC ACCTTTGCCC ACGTAGCGCC CTGCCGATGA TTAACGGCGG CACCACCTTA AAATGGCGGC TCACCGACTC TCACACCCAA TACGGTATTT TGCTGGCGAC GCTGCCCTAT GGACGCCATC TCAGCCACGA TCAGCAACAG TTGGTGGACA CGCTGGTTGA ACAGCTTACC GCGACTCTGG CGCTCGACAG GCATCAGGAG CGCCAGCAGC AGTTGATTGT CATGGAAGAG CGTGCCACCA TTGCCCGCGA ACTGCATGAT TCTATTGCCC AGTCGCTCTC TTGTATGAAG ATGCAGGTGA GCTGCCTGCA AATGCAGGGC GACGTGTTAC CGGAAAGCAG CCGTGAGTTA CTCAGCCAAA TTCGCAATGA GCTGAACTGC TCCTGGGCGC AACTGCGCGA ACTGTTAACC ACTTTCCGCT TACAGTTGAC GGAACCCGGG CTACGTCCGG CGCTGGAAGC AAGCTGCCAG GAGTTCAGCG CCCGGTTTGG CTTTACGGTA AAACTGGATT ATCAGCTTCC CCCCCGCCTG GTGCCGTCAC ACCAGGCGAT ACACCTGTTG CAAATTGCCA GGGAAGCCCT CAGCAACGCC CTTAAACACT CTCATGCCGA CGATGTGGTG GTGACAGTGA CGCAATGTGG CAAACAGGTC AAACTAAAAG TGCAGGATAA TGGCTGCGGC GTCCCGGAAA ACGCCGAACG CAGTAATCAC TACGGCATGA TCATCATGCG CGATCGGGCG CAAAGTTTGC GCGGCGATTG CCAGGTACGC CGACGCGAGA CTGGCGGAAC AGAGGTCACT GTTACTTTTA TTCCAGAAAC AAACTTCACA GAAACCCAGG GAGATACCCA TGAATAA
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Protein sequence | MFKRCFSPLT LVNQLALIVM LSTAIGVAGM AVSGWLVQGV QGSAHAINKA GSLRMQSYRL LAAVPLDAKD QKLLDEMEQT AFSPELTRAA ERDGQQKQLK ALQDYWHNEL SPGLQHAQNA HAVAEDVTRF VAGLDRLVTS FDHTTELRIE RVVLVHRVMA IFMALLLVFT IIWLRVRLLQ PWKQLLSMAR AVSQRDFTQR ANISGRNEMA ALGSALNNMS EELAESYAVL EQRVQEKTAG LEHKNQILSF LWQANRRLHS QAPLCERLSP VLNGLQNLTQ LHDIELRVYD LEDEDNHQEF TCQSDISCDD KGCHLCPRSA LPMINGGTTL KWRLTDSHTQ YGILLATLPY GRHLSHDQQQ LVDTLVEQLT ATLALDRHQE RQQQLIVMEE RATIARELHD SIAQSLSCMK MQVSCLQMQG DVLPESSREL LSQIRNELNC SWAQLRELLT TFRLQLTEPG LRPALEASCQ EFSARFGFTV KLDYQLPPRL VPSHQAIHLL QIAREALSNA LKHSHADDVV VTVTQCGKQV KLKVQDNGCG VPENAERSNH YGMIIMRDRA QSLRGDCQVR RRETGGTEVT VTFIPETNFT ETQGDTHE
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