Gene SNSL254_A1895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1895 
SymbolnarG 
ID6484066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1854592 
End bp1858335 
Gene Length3744 bp 
Protein Length1247 aa 
Translation table11 
GC content56% 
IMG OID642737264 
Productnitrate reductase 1, alpha subunit 
Protein accessionYP_002041014 
Protein GI194445229 
COG category[C] Energy production and conversion 
COG ID[COG5013] Nitrate reductase alpha subunit 
TIGRFAM ID[TIGR01580] respiratory nitrate reductase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.5069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.259133 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAT TCCTGGACCG GTTTCGCTAC TTCAAGCAGA AGGGCGAAAC CTTTGCCGAT 
GGGCACGGCC AGCTTCTCGA AACAAACCGG GACTGGGAGG ACGGATACCG CCAACGTTGG
CAGCATGACA AAATTGTGCG CTCAACCCAT GGGGTGAACT GCACCGGTTC TTGTAGCTGG
AAAATTTATG TCAAAAATGG TCTGGTGACT TGGGAAACAC AGCAAACCGA TTACCCGCGC
ACCCGTCCTG ATATGCCAAA CCATGAACCT CGCGGCTGCC CGCGCGGGGC AAGTTACTCC
TGGTATCTCT ACAGCGCTAA CCGACTGAAA TATCCGCTAA TGCGCAAACG TCTGATGAAG
ATGTGGCGCG AGGCGAAAAA ACTGCATCGC GATCCGGTAG AGGCATGGGC CTCCATTATT
GAAGATGCCG ATAAAGCCAA AAGCTTCAAA CAGGCGCGTG GTCGTGGCGG CTTTGTTCGC
TCCTCATGGC AGGAAGTGAA CGAGCTGATC GCCGCCTCCA ACGTGTACAC CGTGAAAACC
TATGGTCCTG ACCGCGTCGC GGGCTTCTCA CCCATTCCGG CGATGTCGAT GGTCTCCTAC
GCTTCCGGCG CACGTTATCT TTCGCTGATT GGCGGTACCT GCCTGAGCTT CTACGACTGG
TACTGCGACC TGCCGCCAGC CTCCCCGCAA ACCTGGGGCG AGCAGACCGA CGTGCCGGAA
TCCGCTGACT GGTACAACTC CAGCTATATT ATCGCCTGGG GCTCTAACGT GCCGCAAACC
CGTACGCCGG ATGCCCACTT CTTTACCGAA GTACGTTACA AAGGCACCAA AACCGTCGCG
GTGACGCCGG ACTATGCTGA AATCGCCAAA CTGTGCGATC TGTGGCTGGC ACCGAAGCAG
GGGACCGATG CGGCGATGGC GCTGGCGATG GGCCACGTCA TGCTGCGCGA GTTCCACCTC
GACAACCCGC GCCAGTACTT CACCGATTAT GTCCGTCGCT ATACCGACAT GCCAATGCTG
GTGATGCTTG AAGAGCGTGA TGGTTATTAT GCCGCAGGTC GTATGCTGCG CGCTGCCGAT
CTCGTTGATT CGCTGGGGCA GGAAAATAAC CCGGAATGGA AAACCGTCGC TATCAACAGC
AACGGTGAAA TGGTGGCGCC AAACGGTTCA ATTGGTTTCC GCTGGGGCGA AAAAGGCAAA
TGGAACCTCG AACAGCGCGA CGGGACTACC GGTGCAGAAA CTGAATTGCA GCTCAGCTTG
CTGGGCAGCC AGGATGAGAT TGCTGACGTG GGCTTCCCGT ATTTCGGCGG CGAGGGTTCA
GAGTACTTTA ATCATGTGGC GCTGGATAAC GTCCTGCTGC ATAAACTGCC GGCAAAACGT
CTGCAACTGG CCGATGGTTC TTCAGCGTTA GTCACCACCG TGTATGACCT GACCATGGCG
AACTATGGTC TGGAACGCGG CCTGAACGAT GAAAATTGTG CCGCCAGTTA TGATGATACC
AAAGCGTATA CGCCAGCATG GGCCGAGCAG ATCACCGGCG TGCCGCGGGC GCAGATCATC
CGTATCGCAC GGGAGTTCGC CGATAACGCG GACAAAACGC ACGGGCGTTC AATGATTATC
GTTGGCGCCG GTCTGAACCA CTGGTATCAC CTCGATATGA ACTATCGCGG GCTGATCAAT
ATGTTGGTGT TCTGTGGTTG CGTTGGTCAG AGCGGCGGCG GTTGGGCGCA CTACGTCGGC
CAGGAAAAAC TGCGTCCGCA GACCGGCTGG CAGCCGCTGG CGTTTGCCCT TGACTGGCAG
CGTCCGGCGC GTCACATGAA TAGCACCTCT TACTTCTATA ACCACTCCAG CCAGTGGCGC
TACGAGACGG TGACCGCCGA GGAGTTACTG TCGCCGATGG CGGACAAATC CCGCTATAGC
GGTCATCTGA TTGACTTCAA TGTGCGCGCC GAGCGTATGG GCTGGTTGCC GTCGGCGCCG
CAGTTAGGCA CTAACCCGCT GTATATTGCG CGTGAAGCGG AAAAAGCCGG TATGACGCCG
GTAGATTATA CCGTCAAATC CCTGAAAGAG GGTTCGATTC GCTTTGCCGC CGAGCAGCCG
GAAAACGGTA AAAACCACCC GCGTAACCTG TTCATCTGGC GTTCTAACCT GCTTGGGTCT
TCCGGTAAGG GCCATGAGTA TATGCTGAAA TATCTGCTGG GTACTGAGCA TGGTATTCAG
GGGCTGGATC TGGGTAAACA GGGCGGAGTG AAGCCGGAAG AAGTGGAGTG GCGTGACAAT
GGCCTGGACG GCAAACTGGA TCTGGTGGTG ACGCTGGATT TCCGCCTGTC GAGCACCTGC
CTGTACTCCG ATATCGTACT GCCGACGGCG ACCTGGTATG AAAAAGACGA TATGAATACC
TCGGATATGC ATCCGTTTAT TCATCCGCTG TCTGCCGCCG TAGATCCGGC CTGGGAATCG
AAAAGCGACT GGGAAATCTA CAAAGGCATT GCGAAGAAAT TCTCCGAAGT CTGTGTAGGC
CACCTGGGTA AAGAGACTGA CGTCGTGACG CTGCCGATCC AGCACGATTC TGCCGCTGAA
CTGGCGCAGC CGCTGGACGT GAAAGACTGG AAAAAAGGCG AATGCGATCT GATTCCAGGG
AAAACCGCGC CGCACATCAT GACCGTTGAG CGCGATTACC CGGCGACTTA CGAACGCTTT
ACCTCTATCG GCCCGCTGAT GGAGAAAATC GGCAACGGCG GGAAAGGGAT TGCCTGGAAC
ACGCAGAGCG AAATGGACTT GCTGCGTAAG CTTAATTACA CCAAAGCGGA CGGTCCGGCG
AAAGGCCAGC CGATGCTCAA CACGGCGATT GACGCGGCAG AGATGATCCT GACGTTAGCG
CCGGAAACCA ACGGTCAGGT GGCGGTGAAA GCCTGGGCGG CGCTGAGCGA GTTTACCGGT
CGCGATCATA CGCATCTGGC AACCAATAAA GAAGAAGAGA AAATTCGCTT CCGCGATATT
CAGGCCCAGC CGCGCAAAAT TATCTCCAGC CCGACCTGGT CTGGTCTGGA AGATGAGCAC
GTTTCTTATA ACGCCGGTTA TACCAACGTT CACGAGTTGA TCCCGTGGCG TACGCTGTCT
GGTCGTCAAC AGTTGTATCA GGATCACCAG TGGATGCGCG ACTTCGGCGA AAGTCTGCTG
GTGTATCGCC CACCGATCGA CACCCGCTCG GTGAAAGCGG TGATGGGGCG TAAGTCCAAC
GGTAATCCGG AGAAGGCGCT CAACTTCCTG ACGCCGCACC AGAAATGGGG TATCCACTCG
ACCTACAGCG ATAACCTGTT GATGCTGACC TTGTCGCGTG GCGGCCCGAT TGTATGGATG
AGCGAAACCG ACGCCAAAGA TCTGGGCATT GAAGATAACG ACTGGATCGA AGTCTTCAAC
AGCAACGGCG CATTGACCGC ACGCGCAGTG GTCAGCCAGC GTGTACCGAC GGGCATGACC
ATGATGTACC ACGCGCAGGA ACGTATCGTA AACCTGCCGG GGTCGGAAAT TACCCAGCAG
CGCGGCGGTA TTCATAACTC GGTGACGCGC ATTACGCCGA AACCGACCCA TATGATCGGC
GGCTATGCGC AGTTAGCCTA CGGCTTTAAC TACTACGGTA CCGTCGGCTC CAACCGCGAT
GAGTTTGTGG TGGTACGTAA GATGAAGAAC ATTAACTGGT TGGATGGCGA AGGCAATGAC
CAGGTACAGG AGAGCGTAAA ATGA
 
Protein sequence
MSKFLDRFRY FKQKGETFAD GHGQLLETNR DWEDGYRQRW QHDKIVRSTH GVNCTGSCSW 
KIYVKNGLVT WETQQTDYPR TRPDMPNHEP RGCPRGASYS WYLYSANRLK YPLMRKRLMK
MWREAKKLHR DPVEAWASII EDADKAKSFK QARGRGGFVR SSWQEVNELI AASNVYTVKT
YGPDRVAGFS PIPAMSMVSY ASGARYLSLI GGTCLSFYDW YCDLPPASPQ TWGEQTDVPE
SADWYNSSYI IAWGSNVPQT RTPDAHFFTE VRYKGTKTVA VTPDYAEIAK LCDLWLAPKQ
GTDAAMALAM GHVMLREFHL DNPRQYFTDY VRRYTDMPML VMLEERDGYY AAGRMLRAAD
LVDSLGQENN PEWKTVAINS NGEMVAPNGS IGFRWGEKGK WNLEQRDGTT GAETELQLSL
LGSQDEIADV GFPYFGGEGS EYFNHVALDN VLLHKLPAKR LQLADGSSAL VTTVYDLTMA
NYGLERGLND ENCAASYDDT KAYTPAWAEQ ITGVPRAQII RIAREFADNA DKTHGRSMII
VGAGLNHWYH LDMNYRGLIN MLVFCGCVGQ SGGGWAHYVG QEKLRPQTGW QPLAFALDWQ
RPARHMNSTS YFYNHSSQWR YETVTAEELL SPMADKSRYS GHLIDFNVRA ERMGWLPSAP
QLGTNPLYIA REAEKAGMTP VDYTVKSLKE GSIRFAAEQP ENGKNHPRNL FIWRSNLLGS
SGKGHEYMLK YLLGTEHGIQ GLDLGKQGGV KPEEVEWRDN GLDGKLDLVV TLDFRLSSTC
LYSDIVLPTA TWYEKDDMNT SDMHPFIHPL SAAVDPAWES KSDWEIYKGI AKKFSEVCVG
HLGKETDVVT LPIQHDSAAE LAQPLDVKDW KKGECDLIPG KTAPHIMTVE RDYPATYERF
TSIGPLMEKI GNGGKGIAWN TQSEMDLLRK LNYTKADGPA KGQPMLNTAI DAAEMILTLA
PETNGQVAVK AWAALSEFTG RDHTHLATNK EEEKIRFRDI QAQPRKIISS PTWSGLEDEH
VSYNAGYTNV HELIPWRTLS GRQQLYQDHQ WMRDFGESLL VYRPPIDTRS VKAVMGRKSN
GNPEKALNFL TPHQKWGIHS TYSDNLLMLT LSRGGPIVWM SETDAKDLGI EDNDWIEVFN
SNGALTARAV VSQRVPTGMT MMYHAQERIV NLPGSEITQQ RGGIHNSVTR ITPKPTHMIG
GYAQLAYGFN YYGTVGSNRD EFVVVRKMKN INWLDGEGND QVQESVK