Gene SNSL254_A1882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1882 
Symbol 
ID6482243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1847352 
End bp1847858 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content49% 
IMG OID642737255 
Producthypothetical protein 
Protein accessionYP_002041007 
Protein GI194443968 
COG category[S] Function unknown 
COG ID[COG3012] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.974002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.355304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACCCT GGCGTTCAAC GCCGTTTTTT ATATTCAGGG AGATTATTGT GTCTCAGCCT 
TGTCCCTGTG GTAGCGCTGA CGAGTATAGC CTATGTTGTG GTCGTATTGT GTCCGGAGAA
CGAGCAGCAC CCGATCCGTC ACATCTCATG CGCTCTCGTT ACTGCGCTTT TGTGATGAAA
GACGCAGATT ACTTAATTAA GAGCTGGCAT CCAACCTGCA ATGCGGCCGC GTTTCGTGAT
GATATCATCG CCGGATTTGC CAATACCAGG TGGCTCGGCC TGACTATTTT TGAACATACC
TGGTCAGAAG CAGAAAATAC AGGGTATGTT AGTTTTATCG CGCGTTTTTC CGAACAAGGG
AAAACCGGGG CGATTATCGA ACGTTCTCGT TTTATCAAAG AAAACGGTCA GTGGTATTAT
ATTGACGGTA CCCGCCCGCA GTTGGGTCGA AATGATCCCT GCCCGTGCGG TTCAGGCAAA
AAATTTAAAA AGTGCTGCGG CCAGTGA
 
Protein sequence
MPPWRSTPFF IFREIIVSQP CPCGSADEYS LCCGRIVSGE RAAPDPSHLM RSRYCAFVMK 
DADYLIKSWH PTCNAAAFRD DIIAGFANTR WLGLTIFEHT WSEAENTGYV SFIARFSEQG
KTGAIIERSR FIKENGQWYY IDGTRPQLGR NDPCPCGSGK KFKKCCGQ