Gene SNSL254_A1879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1879 
SymbolgalU 
ID6486336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1844169 
End bp1845077 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content50% 
IMG OID642737252 
ProductUTP--glucose-1-phosphate uridylyltransferase subunit GalU 
Protein accessionYP_002041004 
Protein GI194442545 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1210] UDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01099] UTP-glucose-1-phosphate uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCCC TTAATTCGAA AGTCAAAAAA GCCGTTATCC CGGTCGCGGG ATTGGGAACC 
AGGATGCTGC CAGCGACCAA AGCTATCCCG AAAGAGATGC TGCCGCTGGT TGATAAGCCA
TTAATTCAGT ACGTCGTGAA CGAATGTATC GCTGCTGGCA TTACTGAAAT CGTGCTGGTT
ACGCACTCGT CTAAAAACTC TATTGAAAAC CACTTTGATA CCAGTTTTGA GCTGGAAGCG
ATGCTGGAAA AACGCGTTAA GCGTCAGCTT CTGGAGGAGG TTCAGTCTAT TTGCCCTCCG
CATGTCACTA TTATGCAGGT ACGTCAAGGG CTGGCAAAAG GCCTGGGCCA TGCCGTATTG
TGCGCGCATC CCGTTGTCGG AAACGAACCT GTTGCTGTTA TTCTGCCAGA CGTTATTCTT
GACGAATATG AGTCCGACCT GTCTCAGGAT AACCTGGCTG AAATGATCCG CCGTTTCGAT
GAAACCGGCA ATAGCCAGAT TATGGTTGAG CCGGTAGAAG ATGTGACTGC ATACGGCGTG
GTCGATTGTA AAGGCGTTGA GCTGGCGCCG GGCGAAAGTG TGCCGATGGT TGGCGTGGTT
GAAAAACCAA AAGCGGATGT CGCGCCGTCT AACCTTGCGA TTGTCGGGCG TTATGTGTTG
AGCGCGGATA TCTGGGCGTT GCTGGCGAAA ACCCCTCCGG GCGCCGGGGA TGAAATTCAG
TTGACCGATG CTATCGATAT GCTGATCGAA AAAGAAACGG TTGAAGCCTA CCACATGAAG
GGTAAAAGCC ATGACTGTGG TAATAAGTTA GGATATATGC AGGCATTCGT TGAATATGGC
ATCCGTCATA ATTCGCTGGG TGCTGAATTT AAAGCCTGGC TTGAAGAAGA AATGGGTATT
AAGAAGTAA
 
Protein sequence
MAALNSKVKK AVIPVAGLGT RMLPATKAIP KEMLPLVDKP LIQYVVNECI AAGITEIVLV 
THSSKNSIEN HFDTSFELEA MLEKRVKRQL LEEVQSICPP HVTIMQVRQG LAKGLGHAVL
CAHPVVGNEP VAVILPDVIL DEYESDLSQD NLAEMIRRFD ETGNSQIMVE PVEDVTAYGV
VDCKGVELAP GESVPMVGVV EKPKADVAPS NLAIVGRYVL SADIWALLAK TPPGAGDEIQ
LTDAIDMLIE KETVEAYHMK GKSHDCGNKL GYMQAFVEYG IRHNSLGAEF KAWLEEEMGI
KK