| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1874 |
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| Symbol | |
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| ID | 6482386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 1835951 |
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| End bp | 1837582 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642737247 |
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| Product | periplasmic oligopeptide-binding protein |
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| Protein accession | YP_002040999 |
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| Protein GI | 194446472 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 79 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAACA TCACGAAAAA AAGTTTGATT GCAGCGGGAA TACTCACTGC GCTCATCGCC
GCCAGCGCCG CGACTGCGGC AGACGTGCCC GCCGGCGTTC AGTTAGCCGA CAAGCAAACG
TTGGTACGTA ATAACGGATC AGAAGTGCAG TCTCTCGACC CGCATAAAAT TGAAGGCGTG
CCGGAATCGA ACGTCAGCCG TGACCTCTTC GAAGGCTTAT TAATTAGTGA TGTCGAGGGG
CATCCTTCAC CGGGCGTCGC GGAAAAATGG GAAAATAAAG ATTTTAAAGT CTGGACATTC
CATCTACGTG AAAATGCGAA ATGGTCAGAT GGTACGCCCG TCACCGCCCA TGATTTCGTT
TATAGCTGGC AACGCCTGGC CGATCCTAAT ACGGCATCGC CGTACGCCAG CTATCTGCAA
TACGGTCATA TCGCTAATAT CGATGACATT ATCGCCGGTA AAAAACCCGC CACCGATCTG
GGGGTAAAAG CGCTTGATGA TCACACCTTT GAAGTGACCT TAAGTGAGCC GGTGCCTTAT
TTCTACAAAT TGTTGGTCCA CCCTTCAGTG TCGCCTGTAC CGAAATCGGC GGTCGAAAAA
TTTGGCGATA AATGGACGCA ACCGGCCAAT ATTGTCACTA ACGGCGCTTA TAAGTTAAAA
AACTGGGTGG TGAACGAACG TATCGTGCTG GAGCGTAACC CGCAATACTG GGATAACGCC
AAAACCGTCA TCAATCAGGT AACTTATTTG CCTATCTCTT CGGAGGTGAC GGATGTGAAC
CGCTACCGCA GCGGCGAGAT CGATATGACT TATAACAATA TGCCGATCGA ATTATTCCAG
AAACTGAAGA AAGAGATCCC GAATGAAGTC CGCGTAGACC CTTATTTGTG TACCTATTAT
TACGAAATTA ATAATCAAAA AGCGCCGTTT AACGATGTCC GCGTGCGTAC CGCGCTGAAA
CTGGCGTTAG ATCGCGACAT TATTGTTAAT AAGGTTAAAA ATCAGGGCGA TTTACCCGCT
TATAGCTATA CGCCGCCGTA TACCGATGGC GCAAAACTGG TAGAGCCTGA GTGGTTCAAA
TGGTCCCAGC AAAAGCGTAA TGAAGAAGCG AAGAAATTGT TGGCTGAAGC CGGCTTTACG
GCGGATAAGC CCTTAACATT CGACCTGCTG TATAACACCT CCGATCTGCA TAAAAAACTG
GCCATTGCCG TGGCGTCTAT CTGGAAGAAA AATCTGGGCG TCAATGTGAA TCTGGAGAAT
CAGGAATGGA AAACCTTCCT GGATACCCGT CATCAGGGCA CCTTTGATGT CGCCAGAGCC
GGGTGGTGCG CAGATTATAA TGAACCGACC TCGTTCCTGA ATACCATGTT GTCCGACAGT
TCAAATAACA CCGCGCATTA TAAGAGCCCG GCGTTTGATA AGCTGATTGC CGACACGCTG
AAAGTGGCGG ACGATACGCA GCGCAGCGAA CTCTACGCTA AAGCGGAGCA GCAGTTAGAT
AAAGACTCGG CTATTGTGCC GGTGTATTAC TACGTTAACG CGCGCCTGGT GAAACCCTGG
GTGGGCGGGT ATACCGGTAA AGACCCGCTG GATAATATTT ATGTGAAAAA CTTATATATT
ATCAAACATT AA
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| Protein sequence | MSNITKKSLI AAGILTALIA ASAATAADVP AGVQLADKQT LVRNNGSEVQ SLDPHKIEGV
PESNVSRDLF EGLLISDVEG HPSPGVAEKW ENKDFKVWTF HLRENAKWSD GTPVTAHDFV
YSWQRLADPN TASPYASYLQ YGHIANIDDI IAGKKPATDL GVKALDDHTF EVTLSEPVPY
FYKLLVHPSV SPVPKSAVEK FGDKWTQPAN IVTNGAYKLK NWVVNERIVL ERNPQYWDNA
KTVINQVTYL PISSEVTDVN RYRSGEIDMT YNNMPIELFQ KLKKEIPNEV RVDPYLCTYY
YEINNQKAPF NDVRVRTALK LALDRDIIVN KVKNQGDLPA YSYTPPYTDG AKLVEPEWFK
WSQQKRNEEA KKLLAEAGFT ADKPLTFDLL YNTSDLHKKL AIAVASIWKK NLGVNVNLEN
QEWKTFLDTR HQGTFDVARA GWCADYNEPT SFLNTMLSDS SNNTAHYKSP AFDKLIADTL
KVADDTQRSE LYAKAEQQLD KDSAIVPVYY YVNARLVKPW VGGYTGKDPL DNIYVKNLYI
IKH
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