| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1872 |
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| Symbol | oppC |
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| ID | 6483338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 1833986 |
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| End bp | 1834894 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642737245 |
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| Product | oligopeptide ABC transporter permease protein OppC |
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| Protein accession | YP_002040997 |
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| Protein GI | 194442887 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.293082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 82 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGTTAA GTAAGAAAAA CAGCGAGACG CTGGAAAATT TCAGTGAAAA GCTGGAGGTG
GAAGGTCGCA GCCTTTGGCA GGATGCCCGC CGGCGCTTTA TGCATAACCG TGCGGCGGTG
GCCAGTCTTA TTGTCCTGTT TCTGATAGCC CTGTTCGTGA CAGTGGCGCC TATGCTGTCG
CAATTTACCT ATTTCGATAC CGACTGGGGC ATGATGTCCA GCGCGCCGGG TATGGCGTCC
GGTCACTATT TCGGCACTGA CTCTTCCGGG CGCGATCTGT TGGTGCGCGT TGCCATCGGC
GGGCGTATCT CATTGATGGT CGGGATTGCC GCCGCGCTGG TGGCGGTCAT TGTCGGAACG
CTGTATGGCT CGCTGTCCGG CTATCTGGGC GGCAAAATTG ATTCTGTGAT GATGCGTTTG
TTGGAGATCC TCAACTCGTT CCCGTTTATG TTCTTTGTGA TTTTGCTGGT GACGTTTTTT
GGGCAGAACA TTCTGTTGAT TTTCGTCGCT ATCGGCATGG TCTCCTGGCT TGATATGGCG
CGTATCGTGC GTGGCCAAAC CCTAAGTCTT AAACGTAAAG AGTTCATCGA AGCCGCGCAG
GTGGGAGGTG TGTCGACCGC CAGCATTGTG ATCCGCCATA TTGTGCCTAA CGTCCTGGGC
GTAGTGGTAG TGTATGCATC GTTGCTGGTG CCCAGCATGA TTCTGTTTGA GTCTTTCCTC
AGTTTCCTGG GGCTTGGGAC GCAGGAACCG TTAAGCAGTT GGGGAGCGTT GTTGAGCGAT
GGCGCAAATT CAATGGAAGT CTCACCGTGG CTGCTGCTGT TTCCGGCTGG CTTTCTCGTG
GTGACGTTAT TCTGTTTTAA CTTTATTGGC GATGGCCTGC GTGATGCCCT CGACCCGAAA
GATCGTTAA
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| Protein sequence | MMLSKKNSET LENFSEKLEV EGRSLWQDAR RRFMHNRAAV ASLIVLFLIA LFVTVAPMLS
QFTYFDTDWG MMSSAPGMAS GHYFGTDSSG RDLLVRVAIG GRISLMVGIA AALVAVIVGT
LYGSLSGYLG GKIDSVMMRL LEILNSFPFM FFVILLVTFF GQNILLIFVA IGMVSWLDMA
RIVRGQTLSL KRKEFIEAAQ VGGVSTASIV IRHIVPNVLG VVVVYASLLV PSMILFESFL
SFLGLGTQEP LSSWGALLSD GANSMEVSPW LLLFPAGFLV VTLFCFNFIG DGLRDALDPK
DR
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