Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1859 |
Symbol | |
ID | 6482229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 1824242 |
End bp | 1824880 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642737233 |
Product | outer membrane protein W |
Protein accession | YP_002040985 |
Protein GI | 194445417 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAT TTACAGTGGC GGCACTGGCG TTAACAACTC TTCTCTCAGG CAGCGCTTTC GCGCACGAAG CCGGAGAATT CTTTATGCGT GCAGGTCCGG CAACCGTCAG ACCTACAGAA GGGGCGGGTG GTACGCTGGG GCATTTAAAC GGGTTTGATG TGAGTAATAA CACGCAACTC GGCCTGACAT TCACTTACAT GGCGACGGAC AATATCGGGG TTGAATTGCT GGCGGCCACG CCGTTCCGCC ATAAGGTGGG TACGGGCGCG ACGGGAGATA TCGCCACGGT CCACCTGTTA CCGCCAACGT TAATGGCGCA GTGGTATTTC GGCGATTCCA GCAGCAAAGT GCGTCCTTAT GTCGGCGTGG GGGTGAACTA CACCACCTTC TTCGATAACG ACTTTAACGA TAATGGTAAA AATGCCGGGC TGTCCGATCT GAGCTTTAAG GATTCCTGGG GCGCGGCAGG GCAAGTTGGG GTAGATTACC TGATTAACCG CGACTGGTTA ATTGGCGCCT CTGTCTGGTA CATGGATATT GATACTACCG CCAATTATAA AATGGGCGGC GTTCAGCATC ATGACAGCGT GCGTCTGGAC CCATGGGTAT TTATGTTCTC GGCAGGCTAT CGTTTCTAA
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Protein sequence | MKKFTVAALA LTTLLSGSAF AHEAGEFFMR AGPATVRPTE GAGGTLGHLN GFDVSNNTQL GLTFTYMATD NIGVELLAAT PFRHKVGTGA TGDIATVHLL PPTLMAQWYF GDSSSKVRPY VGVGVNYTTF FDNDFNDNGK NAGLSDLSFK DSWGAAGQVG VDYLINRDWL IGASVWYMDI DTTANYKMGG VQHHDSVRLD PWVFMFSAGY RF
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