Gene SNSL254_A1856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1856 
Symbol 
ID6482856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1822179 
End bp1822682 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content43% 
IMG OID642737230 
Producthypothetical protein 
Protein accessionYP_002040982 
Protein GI194446253 
COG category[S] Function unknown 
COG ID[COG3685] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.542717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCA AAACCGTTGA AGACCTTTTT ATCCATCTAC TTTCAGATAC CTATAGTGCA 
GAAAAACAAT TAACCAAGGC TCTTCCTAAA CTTGCCAGAG CCACGTCCAA TGAAAAATTA
AGCCAGGCCT TTCAATCTCA TCTTGAAGAA ACCCAGGGTC AGATTGAACG TATTGATCAG
ATCGTCGAAT CTGAATCTGG CATTAAACTG AAAAGAATGA AATGCGTCGC TATGGAAGGG
CTGATTGAAG AAGCCAATGA AGTCATCGAA AGTACGGAGA AAAACGAAGT ACGCGATGCA
GCGCTTATCG CCGCGGCGCA AAAAGTCGAG CATTACGAAA TCGCCAGCTA CGGCACGCTA
GCCACCCTGG CCGAGCAGCT CGGCTATAGC AAAGCATTAA AACTGCTCAA AGAAACCCTC
GACGAGGAAA AACAAACTGA TTTAAAACTT ACCGATTTAG CAGTCAGCAA TGTTAATAAA
AGTGCTGAAC GCAAATCGAA ATAA
 
Protein sequence
MNIKTVEDLF IHLLSDTYSA EKQLTKALPK LARATSNEKL SQAFQSHLEE TQGQIERIDQ 
IVESESGIKL KRMKCVAMEG LIEEANEVIE STEKNEVRDA ALIAAAQKVE HYEIASYGTL
ATLAEQLGYS KALKLLKETL DEEKQTDLKL TDLAVSNVNK SAERKSK