Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1851 |
Symbol | trpD |
ID | 6482794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1816461 |
End bp | 1818056 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642737225 |
Product | bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase |
Protein accession | YP_002040977 |
Protein GI | 194444295 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0512] Anthranilate/para-aminobenzoate synthases component II [COG0547] Anthranilate phosphoribosyltransferase |
TIGRFAM ID | [TIGR00566] glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.468374 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.00404515 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTGATA TTCTGCTGCT CGATAACATC GACTCGTTTA CCTGGAACCT GGCAGATCAG CTACGGACCA ACGGTCATAA CGTGGTGATT TACCGTAACC ATATTCCGGC GCAGACGCTT ATCGATCGCC TGGCGACAAT GAAAAATCCG GTGCTAATGC TCTCCCCCGG TCCGGGCGTT CCCAGCGAGG CAGGCTGTAT GCCGGAGCTG TTGACCCGAC TACGCGGCAA GTTACCGATC ATCGGCATTT GTCTGGGGCA TCAGGCGATT GTCGAAGCTT ACGGCGGTTA TGTCGGTCAG GCGGGAGAAA TCCTGCATGG CAAAGCCTCC AGCATTGAAC ATGACGGTCA GGCGATGTTC GCCGGTCTGG CGAATCCGCT ACCGGTCGCG CGTTATCATT CGCTGGTCGG CAGTAATGTT CCTGCCGGGC TAACCATTAA CGCCCATTTC AACGGCATGG TGATGGCGGT ACGTCATGAT GCGGATCGCG TTTGCGGTTT TCAATTTCAT CCTGAGTCCA TCCTGACGAC ACAGGGCGCG CGTCTACTGG AGCAAACATT AGCCTGGGCG CAGCAAAAGC TGGAGCCGAC CAACACCCTA CAGCCGATTC TGGAGAAACT CTATCAGGCG CAAACACTGA CGCAACAAGA GAGCCATCAG TTGTTTTCGG CGGTCGTCCG CGGCGAACTT AAGCCTGAAC AGCTCGCCGC CGCGCTGGTG AGCATGAAAA TTCGCGGCGA GCATCCCAAT GAAATTGCCG GCGCCGCCAC TGCGTTGCTG GAAAATGCCG CCCCGTTCCC GCGCCCGGAG TATCTGTTTG CGGATATCGT TGGTACCGGC GGCGATGGCA GCAACAGTAT CAATATCTCT ACCGCCAGCG CCTTTGTCGC GGCGGCCTGT GGACTGAAAG TGGCGAAACA CGGCAACCGC AGCGTGTCCA GCAAATCGGG GTCATCCGAT CTGTTGGCGG CGTTCGGTAT TAATCTGGAT ATGAACGCCG ATAAATCACG TCAGGCGTTA GATGAACTGG GCGTCTGTTT CCTGTTCGCG CCGAAATATC ACACCGGATT CCGTCACGCG ATGCCGGTTC GCCAACAGTT AAAAACGCGA ACCCTGTTCA ACGTACTCGG CCCGCTGATC AATCCGGCGC ATCCGCCGCT GGCGTTGATT GGCGTCTATA GCCCGGAACT GGTGCTGCCG ATTGCGGAAA CCTTAAGGGT ACTGGGCTAT CAGCGCGCGG CGGTAGTACA TAGCGGCGGC ATGGATGAGG TTTCGCTCCA TGCGCCGACG ATTGTCGCGG AGCTGCATAA CGGCGAAATT AAAAGCTATC AACTGACGGC GGAGGATTTT GGCCTGACGC CTTACCATCA GGATCAGTTG GCTGGCGGCA CGCCGGAAGA AAACCGTGAC ATTCTGACGC GGTTATTACA AGGTAAAGGC GATGCCGCGC ATGAGGCCGC CGTCGCCGCC AACGTGGCGA TGCTGATGCG TCTGCATGGT CAGGAAGATC TCAAGGCCAA CGCGCAAACC GTGCTTGATG TTCTGCGCAA CGGCACCGCA TATGACAGAG TCACCGCACT GGCGGCAAGA GGGTAA
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Protein sequence | MADILLLDNI DSFTWNLADQ LRTNGHNVVI YRNHIPAQTL IDRLATMKNP VLMLSPGPGV PSEAGCMPEL LTRLRGKLPI IGICLGHQAI VEAYGGYVGQ AGEILHGKAS SIEHDGQAMF AGLANPLPVA RYHSLVGSNV PAGLTINAHF NGMVMAVRHD ADRVCGFQFH PESILTTQGA RLLEQTLAWA QQKLEPTNTL QPILEKLYQA QTLTQQESHQ LFSAVVRGEL KPEQLAAALV SMKIRGEHPN EIAGAATALL ENAAPFPRPE YLFADIVGTG GDGSNSINIS TASAFVAAAC GLKVAKHGNR SVSSKSGSSD LLAAFGINLD MNADKSRQAL DELGVCFLFA PKYHTGFRHA MPVRQQLKTR TLFNVLGPLI NPAHPPLALI GVYSPELVLP IAETLRVLGY QRAAVVHSGG MDEVSLHAPT IVAELHNGEI KSYQLTAEDF GLTPYHQDQL AGGTPEENRD ILTRLLQGKG DAAHEAAVAA NVAMLMRLHG QEDLKANAQT VLDVLRNGTA YDRVTALAAR G
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