Gene SNSL254_A1847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1847 
Symbol 
ID6484509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1813129 
End bp1813749 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content53% 
IMG OID642737222 
Producthypothetical protein 
Protein accessionYP_002040974 
Protein GI194443555 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.10405 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.000163651 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCAGT TTTTTTATAT CCATCCGGAT AACCCACAGC AACGGCTGAT TAATCAGGCC 
GTCGACATTG TGCGTAAAGG CGGTGTTATT GTTTATCCAA CCGATTCCGG CTATGCCCTG
GGTTGTAAAA TTGAAGACAA AGGCGCAATG GAGCGCATTT GCCGCATCCG TCATCTGCCG
GACGGCCACA ACTTCACGCT GATGTGCCGC GATTTGTCCG AGTTGTCGAC CTACTCCTAC
GTCGACAACG TGGCATTTCG TCTGATGAAA AACAATACGC CGGGTAATTA CACCTTTATC
CTGAAGGGGA CAAAAGAGGT GCCGCGCCGT CTGTTGCAGG AAAAGCGTAA AACTATCGGC
CTGCGCGTAC CGTCAAACCC GATTGCGCTG GCGTTATTGG ATACGCTGGG CGAACCGATG
CTCTCGACGT CGTTGATGCT GCCTGGCAGC GACTTTACCG AGTCGGACCC GGAGGAGATT
AAAGATCGGC TGGAGAAGCA GGTGGATCTG ATCATCCACG GCGGTTACCT CGGTCAACAG
CCTACCACGG TAATTGATTT GACCAATGAC TCCCCGGTGG TGCTGCGCGA AGGCGTCGGC
GACGTTACAC CTTTCTTATA A
 
Protein sequence
MSQFFYIHPD NPQQRLINQA VDIVRKGGVI VYPTDSGYAL GCKIEDKGAM ERICRIRHLP 
DGHNFTLMCR DLSELSTYSY VDNVAFRLMK NNTPGNYTFI LKGTKEVPRR LLQEKRKTIG
LRVPSNPIAL ALLDTLGEPM LSTSLMLPGS DFTESDPEEI KDRLEKQVDL IIHGGYLGQQ
PTTVIDLTND SPVVLREGVG DVTPFL