Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1846 |
Symbol | rluB |
ID | 6482299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 1812153 |
End bp | 1813028 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642737221 |
Product | 23S rRNA pseudouridylate synthase B |
Protein accession | YP_002040973 |
Protein GI | 194444498 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.539759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.0000324002 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGAAA AGTTACAAAA AGTGCTGGCG CGCGCTGGCC ACGGCTCTCG CCGTGAAATC GAATCCATTA TTGAAGCGGG ACGTGTCAGC GTTGACGGTA AAATCGCCAC GCTTGGCGAT CGTGTTGAAG TCACTCCCGG TTTGAAAATC CGTATTGACG GTCACCTGAT TTCGGTGAAA GAGTCGGCGG AACAAATTTG CCGCGTTCTG GCCTATTACA AACCAGAAGG TGAACTGTGT ACCCGCAATG ACCCTGAAGG GCGACCAACC GTTTTTGATC GCTTACCGAA ACTGCGCGGC GCGCGGTGGA TTGCGGTAGG ACGTCTGGAT GTCAACACCT GCGGGCTATT GTTATTTACC ACCGACGGTG AACTGGCGAA CCGCCTGATG CACCCTAGTC GTGAAGTTGA ACGTGAATAT GCCGTGCGCG TGTTCGGTCA GGTGGATGAA TCGAAACTGC GTGATTTAAG CCGTGGCGTA CAGTTGGAAG ATGGCCCGGC GGCATTTAAG ACCATTAAAT TCAGCGGCGG CGAAGGCATT AACCAGTGGT ACAACGTGAC GCTGACGGAA GGGCGCAACC GCGAAGTTCG CCGACTGTGG GAAGCGGTAG GCGTTCAGGT CAGCCGTCTG ATCCGCGTTC GTTACGGCGA TATCCCGCTG CCGAAAGGCC TGCCGCGCGG CGGCTGGACT GAGCTCGACC TCGCGCAAAC GAACTATCTG CGTGGTCTGG TAGAGCTCCC GCCGGAAACC TCGTCGAAGG TTGCCGTCGA AAAAGACCGT CGTCGTATGA AAGCGAACCA GATCCGTCGG GCGGTAAAAC GCCACAGCCA GATAGCTGGC GGACGCCGCT CCGGTGGGCG TAATAACAAC GGGTAA
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Protein sequence | MSEKLQKVLA RAGHGSRREI ESIIEAGRVS VDGKIATLGD RVEVTPGLKI RIDGHLISVK ESAEQICRVL AYYKPEGELC TRNDPEGRPT VFDRLPKLRG ARWIAVGRLD VNTCGLLLFT TDGELANRLM HPSREVEREY AVRVFGQVDE SKLRDLSRGV QLEDGPAAFK TIKFSGGEGI NQWYNVTLTE GRNREVRRLW EAVGVQVSRL IRVRYGDIPL PKGLPRGGWT ELDLAQTNYL RGLVELPPET SSKVAVEKDR RRMKANQIRR AVKRHSQIAG GRRSGGRNNN G
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