| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1818 |
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| Symbol | sapC |
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| ID | 6483587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 1782632 |
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| End bp | 1783522 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642737194 |
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| Product | peptide ABC transporter permease protein SapC |
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| Protein accession | YP_002040946 |
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| Protein GI | 194446524 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4171] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.988595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00000000000104568 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTTACG ATAGCGTATA CAGCGAAAAG CGCCCGCCAG GCACCCTGCG CACTGCCTGG
CGTAAATTTT ATAGCGACGC GCCTGCGATG GTAGGTCTGT ATGGATGCGC CGGTCTGGCG
TTGCTGTGTA TTTTTGGCGG CTGGATCGCG CCCTATGGTA TCGATCAGCA ATTTCTGGGC
TATCAGCTAC TGCCACCCTC CTGGTCACGC TATGGCGAAG TCTCCTTTTT TCTGGGGACT
GACGATCTGG GGCGCGATGT GCTGAGCCGC CTGTTAAGCG GCGCGGCGCC CACGGTCGGC
GGCGCGTTTA TCGTAACGCT GGCGGCTACG CTATGTGGAT TAGTCCTCGG CGTAGTGGCA
GGCGCGACGC ACGGTTTACG CTCTGCCGTG CTGAACCATA TTCTGGACAC GCTGCTTTCC
ATCCCTTCGC TCTTGCTGGC GATTATCGTC GTGGCATTTG CCGGCCCACA TCTGTCACAC
GCGATGTTTG CCGTCTGGCT GGCCCTGTTG CCGCGAATGG TACGTTCCGT CTACAGCATG
GTGCATGATG AACTGGAAAA AGAGTACGTC ATTGCCGCCC GTCTGGATGG CGCGACAACG
CTGAATATTC TGTGGTTCGC CATTTTACCG AATATTACCG CCGGTCTGGT CACCGAAATT
ACCCGGGCGC TGTCGATGGC GATTCTGGAC ATCGCCGCGC TGGGATTTTT AGATCTCGGC
GCGCAGCTTC CCTCTCCTGA ATGGGGCGCC ATGTTGGGGG ATGCGCTGGA GCTAATCTAT
GTCGCGCCGT GGACCGTTAT GCTACCCGGC GCGGCGATAA CGCTCAGTGT TTTACTGGTA
AACCTGCTCG GAGATGGGAT TCGTCGTGCG ATTATTGCGG GGGTGGAATA A
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| Protein sequence | MPYDSVYSEK RPPGTLRTAW RKFYSDAPAM VGLYGCAGLA LLCIFGGWIA PYGIDQQFLG
YQLLPPSWSR YGEVSFFLGT DDLGRDVLSR LLSGAAPTVG GAFIVTLAAT LCGLVLGVVA
GATHGLRSAV LNHILDTLLS IPSLLLAIIV VAFAGPHLSH AMFAVWLALL PRMVRSVYSM
VHDELEKEYV IAARLDGATT LNILWFAILP NITAGLVTEI TRALSMAILD IAALGFLDLG
AQLPSPEWGA MLGDALELIY VAPWTVMLPG AAITLSVLLV NLLGDGIRRA IIAGVE
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