Gene SNSL254_A1809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1809 
Symbol 
ID6485350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp1775283 
End bp1776680 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content54% 
IMG OID642737185 
Producthypothetical protein 
Protein accessionYP_002040937 
Protein GI194444750 
COG category[R] General function prediction only 
COG ID[COG3106] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0000109841 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGCGAC TTAAAACTGA ACTCAACGCG CTGGTCAATC GTGGGGTAGA CAGGCATTTG 
CGTCTTGCCG TAACCGGGTT GAGCCGCAGC GGTAAAACAG CGTTTATCAC GGCGATGGTT 
AACCAGTTGC TTAATGTCCA CGCGGGCGCG CGCTTACCGT TGCTCAGCGC GGTACGCGAA 
GAACGCCTGC TTGGCGTAAA GCGCGTGCCT CAACGTGATT TTGGTATTCC CCGTTTTACC 
TACGACGAGG GGATACTTCA GCTTTATGGC AATCCTCCCG CATGGCCCAC ACCGACGCGC 
GGCGTGAGTG AGATTCGGCT GGCGTTGCGC TATCGCTCCA ACGACTCGCT GCTGCGCCAT 
TTTAAAGATA CCTCGACATT GTATCTGGAG ATTGTGGACT ATCCAGGGGA ATGGTTACTC 
GATCTGCCCA TGCTGGCTCA GGATTATTTA AGCTGGTCCC GTCAGATGAA CGGCTTGTTA 
CAAGGGCAAC GCGCTGAGTG GGCCGCAAAA TGGCGGCAAC TATGCGACGG ACTCGATCCG 
CTGGCGCCCG CCGATGAAAA TCGGCTGGCG GAGATTGCCG CCGCCTGGAC GGATTATTTG 
CATCAGTGTA AATCGCAGGG ATTGCATTTT ATTCAGCCTG GACGGTTTGT TTTGCCGGGC 
GATATGGCGG GCGCGCCAGC GTTGCAGTTT TTCCCGTGGC CGGATGTGGA CGCCTTCGGC 
GAGTCAAAAC TGGCGCAGGC GGATAAACAG ACCAACGCTG GAATGCTGCG CGAACGCTTT 
AACTACTATT GCGAAAAAGT GGTCAAGGGG TTCTACAAAA ATCATTTTCT ACGCTTTGAT 
CGCCAGATTG TGCTGGTCGA CTGTCTGCAA CCGCTTAATA GCGGGCCGCA GGCGTTTAAT 
GATATGCGTC TCGCCTTAAC GCAGTTGATG CAAAGTTTTC ACTATGGCCA GCGGACTCTG 
TTTCGCCGCC TGTTTTCGCC GGTGATTGAT AAATTGCTGT TCGCCGCGAC GAAAGCCGAC 
CATGTCACCC TCGACCAACA TGCCAATATG GTGGCCTTGC TCCAGCAGCT TATTCAGGAT 
GCCTGGCAAA ATGCCGCGTT TGAAGGCATT AGTATGGATT GCCTGGGGCT GGCGTCGGTA 
CAGGCGACCA CCAGCGGCGT GATTGAGGTC AACGGTGAAA AAATCCCGGC TTTACGTGGA 
AACCGTTTGA GTGACGGCGC GCCGTTAACC GTGTACCCCG GCGAAGTGCC TTCGCGTTTG 
CCGGGACAAG CGTTTTGGGA TAGTCAGGGT TTTCAGTTCG AAGCCTTTCG TCCGCAGGTG 
ATGGATGTTG ATAAACCGTT ACCACATATT CGTCTGGACG CTGCGCTGGA TTTTTTAATA 
GGAGATAAGC TGCGATGA
 
Protein sequence
MKRLKTELNA LVNRGVDRHL RLAVTGLSRS GKTAFITAMV NQLLNVHAGA RLPLLSAVRE 
ERLLGVKRVP QRDFGIPRFT YDEGILQLYG NPPAWPTPTR GVSEIRLALR YRSNDSLLRH 
FKDTSTLYLE IVDYPGEWLL DLPMLAQDYL SWSRQMNGLL QGQRAEWAAK WRQLCDGLDP 
LAPADENRLA EIAAAWTDYL HQCKSQGLHF IQPGRFVLPG DMAGAPALQF FPWPDVDAFG 
ESKLAQADKQ TNAGMLRERF NYYCEKVVKG FYKNHFLRFD RQIVLVDCLQ PLNSGPQAFN 
DMRLALTQLM QSFHYGQRTL FRRLFSPVID KLLFAATKAD HVTLDQHANM VALLQQLIQD 
AWQNAAFEGI SMDCLGLASV QATTSGVIEV NGEKIPALRG NRLSDGAPLT VYPGEVPSRL 
PGQAFWDSQG FQFEAFRPQV MDVDKPLPHI RLDAALDFLI GDKLR