Gene SNSL254_A1799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1799 
Symbol 
ID6483156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1765157 
End bp1766026 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content46% 
IMG OID642737175 
Product2,5-diketo-D-gluconic acid reductase A 
Protein accessionYP_002040927 
Protein GI194443741 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0682871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.021154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAATATT CAATATTAAG TAACAACCTT AAAATGCCTA TGGTGGGTTT TGGCGTTTTT 
AAGGTAACCG ACAAAGAAGA ATGTCAGCAG TCAGTGTTAA GCGCTATTCG CAGCGGTTAT
CGTCTTATCG ATACCGCTGC GGTATACGGC AATGAAGATG CCGTTGGTGA CGCTGTTCGT
AAAGCTATCG CGACAGGTCT GTGTACCCGT GAGGAGTTAT TTATTACTTC TAAACTGTGG
GTGCAAGATA TGGCTAACTA CGATCTGGCC AAAGCAGGTA TTGAAGCGTC GCTGAAAAAA
TCCGGGTTAG ATTATTTTGA TCTCTATTTA TTGCATCAGG CAATGGGCGA TTATTTTAGT
GCGTGGCGCG CGCTGGAAGA CGCTTATGAA GCCGGTAAAC TAAAAGCCAT TGGCGTGTCC
AACTTCTATG CGCATGTGTT AGCCAACTTC TGTGAAACCG TCAGAATTAC GCCAATGGTA
AACCAGGTCG AATTGCATCC ATACTTTGCA CAACCCGCCG CGCTGGAAAC CATGAAGCAT
TATAACGTTC AGCCTGAAGC GTGGGCGCCG TTAGGCGGCG GGAGACATAA ACCGTATGAA
AATGTCATGC TTCAAAGGAT TGCCGATGCC CATCAAAAAA CCATCGCGCA GGTTGTCCTG
CGTTGGAACG TGCAGCGTGG CGTCACGGTT ATTCCTAAAT CCACTCGACA AGAACGTATT
GAAGAGAACT TTGCTATCTG GGATTTCTCA CTAACGGATA ACGAAATGGC TCAAATCAAC
GCCCTTGATT TAGGCTACGT TGGCGAAGCG GTGAAGCATT TTAATCCTGA ATTTGTTCGC
GGTTGTCTTG GCGTTAAAAT CCACGATTGA
 
Protein sequence
MEYSILSNNL KMPMVGFGVF KVTDKEECQQ SVLSAIRSGY RLIDTAAVYG NEDAVGDAVR 
KAIATGLCTR EELFITSKLW VQDMANYDLA KAGIEASLKK SGLDYFDLYL LHQAMGDYFS
AWRALEDAYE AGKLKAIGVS NFYAHVLANF CETVRITPMV NQVELHPYFA QPAALETMKH
YNVQPEAWAP LGGGRHKPYE NVMLQRIADA HQKTIAQVVL RWNVQRGVTV IPKSTRQERI
EENFAIWDFS LTDNEMAQIN ALDLGYVGEA VKHFNPEFVR GCLGVKIHD