Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1798 |
Symbol | |
ID | 6482791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1764353 |
End bp | 1765066 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642737174 |
Product | oxidoreductase |
Protein accession | YP_002040926 |
Protein GI | 194443014 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0401257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.0380539 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTAT TTCGCAACAA ATCTGTACTG GTTTTAGGGG GAAGTCGTGG TATCGGCGCG GCTATTGTAC GACGCTTTAG CGCTGACGGC GCATCGGTCG TTTTCAGCTA CGCCGGATCG CGTGAAGCTG CCGAAAAACT GGCAGCGGAA ACCGGAAGCA CCGCCATTCA GACGGATAGC GCCGATCGTG ATGCCGTCAT CAGCCTCGTG CGTGAGTACG GACCGCTGGA TATTCTGGTC GTCAATGCGG GCGTGGCTCT CTTCGGCGAT GCGCTGGAAC AAGATAGCGA TGCGATAGAT CGTTTGTTCC GCATTAATAT CCATGCGCCT TACCATGCGT CAGTCGAAGC AGCCCGCCAC ATGCCGGAAG GTGGACGCAT TATTATTATC GGTTCCGTGA ATGGCGATCG GATGCCCGTA CCGGGAATGG CCGCGTACGC CGCCAGTAAA TCAGCCCTAC AAGGGCTGGC GCGCGGCTTA GCCCGTGATT TTGGCCCCCG CGGGATTACA ATAAATGTAG TGCAGCCAGG CCCCATTGAT ACCGACATCA ATCCGGAAAA TGGCCCAATG AAAGAGCTGA TGCACAGTTT CATGGCGATC AAACGACACG GAAGACCTGA AGAAGTGGCT GGAATGGTGG CATGGCTTGC CGGTCCGGAA GCCTCTTTCG TCACCGGTGC GATGCACACC ATCGATGGTG CCTTCGGCGC CTGA
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Protein sequence | MTLFRNKSVL VLGGSRGIGA AIVRRFSADG ASVVFSYAGS REAAEKLAAE TGSTAIQTDS ADRDAVISLV REYGPLDILV VNAGVALFGD ALEQDSDAID RLFRINIHAP YHASVEAARH MPEGGRIIII GSVNGDRMPV PGMAAYAASK SALQGLARGL ARDFGPRGIT INVVQPGPID TDINPENGPM KELMHSFMAI KRHGRPEEVA GMVAWLAGPE ASFVTGAMHT IDGAFGA
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