Gene SNSL254_A1792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1792 
Symbol 
ID6484907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1757552 
End bp1759534 
Gene Length1983 bp 
Protein Length660 aa 
Translation table11 
GC content52% 
IMG OID642737168 
Producthypothetical protein 
Protein accessionYP_002040920 
Protein GI194446011 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.66641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.146371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTTTTT CTAAAAAACC CATTACTAAA TATATAACCT GGGCCATTGT TACCAGTCAG 
ATTCCACTCC CGGTCATTGC TGATAGCGAT AGTGAAATTC AGTCGTGGAT TGCGGGGACG
GCATCGTCTA TTTCTCCGCA CCTGCAGGAG GGGACGCTGG AGGATTATGC CAAAGGAAAA
ATCAAGGCGT TACCAGGGCA AGCCGCTAAT CATCTGGTGA ACGAGGGGAT AAAGAACGCT
TTTCCGGAGA TTATTTTCCG TGGTGGCGTC AATCTTGAAG ATGGCGCGAA ATATCGCTCA
TCAGAGTTCG ATATGTTTAT TCCTGTCCAG GAAACAACAT CGTCTTTACT CTTTGGCCAG
CTTGGCTTTC GCGACCACGA CAACAGCAGT TTCGATGGAC GCACTTATGT TAACGTTGGT
GTCGGTTACC GCCAGGAGGT CAATGGATGG CTGCTCGGCG TCAATACGTT TCTGGATGCC
GACATCCGTT ACTCCCACTT ACGTGGCGGC ATTGGCGGGG AAGTCTATAA AGACAGTATG
GCCTTTTCCG GCAACTATTA TTTCCCTCTC ACCGGCTGGA AAACGTCAGC AGCGCATGAG
TTACATGATG AGCGTCCGGC ATATGGCTTT GATCTGCGAA CAAAAGGCAC GCTCCCCGAT
TTTCCCTGGT TCAGTGGCGA GCTGACATAT GAACAGTATT ACGGGGATAA AGTTGATCTA
TTGGGTAACG GTACGTTAAG CCGGAATCCC CGCGCCGCAG GTGCGGCTCT GGTCTGGAAT
CCTGTCCCCT TGCTTGAGGT CAGAGCAGGA TATCGGGACG CCGGTAATGG CGGATCGCAG
GCAGAGGGCG GTCTGAGAGT CAATTATTCC TTCGGTACGC CGTTACATGA ACAGCTTGAT
TACCGCAACG TTGGGGCGCC GTCGAATACG ACTAACCGGC GTGCCTTTGT TGATCGTAAT
TACGATATCG TCATGGCGTA TCGGGAGCAG GCCAGCAAAA TCCGCATTAC GGCAATGCCG
GTGTCAGGCC TGTCCGGGAC GCTGGTGACA TTAATGGCGA CGGTAGATAG CCGTTACCCG
GTTGAGAAGG TTGAGTGGTC GGGTGATGCG GAGCTTCTCG CCGGACTCCA GCTTCAGGGG
AGTCTGGGCA GCGGCCTTAT CCTTCCACAA CTTCCGCTGA CGGTGACCGA CGGTCAGGAG
TATAGCCTTT ATTTAACGGT GACTGACAGC CGGGGTACTC GCGTGACCTC CGAGCGTATC
CCGGTAAGGG TGACACAGGA TGAGACCAGT TTCCGTTCCT GGATAAATGT TATCAATGAC
GATGTTCAGG TTGAGGACGG CAACTTTGTT GTCAGTACGC CGCTTCCTGC CGGAGAAGAG
GGGAAGGTTA TTGAGTGGCA CTACGTGCGC GAGCGTTCTG AAGAGGAGTG GGCGTCGCTC
AAACCACGTA ATATTAAGTA TCAATCAGAT ACGCCGGGTC TGGCATTTAA AGCGCTCGGT
GGTACAGAGC GTGATGGTCA TTGGGTTGAA CGGGTTCTGG TGACCCATAT CGGCGATGAT
ACCCGCCCGC TCAAATTACA TATTGAAGCA AGCGGACCAG ACGATAAACA TCCGGTGAAG
GGGACCGTAC TGCTGCAAGC GCAGTCAGAC AGCATTGCGC AGAAGGTCAC TTCTGTGGAG
GTGCTTTTTA CGCCGGGTAC TGAAGAGGAC AACGGAAGTG TTACCGCGCC AGTCGTCGGA
ACGGAAATGC GAGCCAGAAC ACTTTGTGTA AATAACACGG ACTGTACTGA TGCGTTTAAT
TATCAGTGGG AAATCTCGGA TGAAATGAAA TCCTGGAAAT CCGTACCGGG GGCGACAAAG
GCCACCTGGC TTATCCCTTA TAGCCTTAAC GGGGAACCGC TTCAGAATAA ATATATCCGC
ATCAGAATTA TTTCTGATAA AGAAAATGCC AAGAGTTCTA CCGCAGCATC TGATGCGAAT
TAA
 
Protein sequence
MVFSKKPITK YITWAIVTSQ IPLPVIADSD SEIQSWIAGT ASSISPHLQE GTLEDYAKGK 
IKALPGQAAN HLVNEGIKNA FPEIIFRGGV NLEDGAKYRS SEFDMFIPVQ ETTSSLLFGQ
LGFRDHDNSS FDGRTYVNVG VGYRQEVNGW LLGVNTFLDA DIRYSHLRGG IGGEVYKDSM
AFSGNYYFPL TGWKTSAAHE LHDERPAYGF DLRTKGTLPD FPWFSGELTY EQYYGDKVDL
LGNGTLSRNP RAAGAALVWN PVPLLEVRAG YRDAGNGGSQ AEGGLRVNYS FGTPLHEQLD
YRNVGAPSNT TNRRAFVDRN YDIVMAYREQ ASKIRITAMP VSGLSGTLVT LMATVDSRYP
VEKVEWSGDA ELLAGLQLQG SLGSGLILPQ LPLTVTDGQE YSLYLTVTDS RGTRVTSERI
PVRVTQDETS FRSWINVIND DVQVEDGNFV VSTPLPAGEE GKVIEWHYVR ERSEEEWASL
KPRNIKYQSD TPGLAFKALG GTERDGHWVE RVLVTHIGDD TRPLKLHIEA SGPDDKHPVK
GTVLLQAQSD SIAQKVTSVE VLFTPGTEED NGSVTAPVVG TEMRARTLCV NNTDCTDAFN
YQWEISDEMK SWKSVPGATK ATWLIPYSLN GEPLQNKYIR IRIISDKENA KSSTAASDAN