| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1786 |
|---|
| Symbol | |
|---|
| ID | 6483513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 1753127 |
|---|
| End bp | 1754158 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642737162 |
|---|
| Product | MscS family inner membrane protein YnaI |
|---|
| Protein accession | YP_002040914 |
|---|
| Protein GI | 194444932 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0668] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0416525 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 0.388102 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACTG AATTTTTTCT CAAAAACGCA TTTAATCTGG CGATACTTTT CAGTTGCGGT
ATGGCGTTGC TGGTCGTGAG ATTTTGGCTC AGCCGTAACG TACAGTGGAA GAAAGGATTC
ACGTTCCATG CGGCACAGTT TTTTATTTAT GCAATTATTA TTGGGACCAT CGGGAGCATC
CTGAATAATG CTATTGAAGA TTATAATTTG CGTTTTATCT CTTCCGGGGT CATTGATTTT
ATCTGCACCT CGCTCATTGC GCTTATTCTG ACGATAAAAC TTTTCCTGAT TATTAACCAA
TTTGAAAAAG CACAGGTCAA TAAAGGTAGA GATGTCACCA GTACCCGTAT TCTGGCACGG
GTCATAAAAA TAACCATTAT TGTCGCGATT GTCTTACTGT ATGGCGAACA TTTTGGCATG
AGTCTGTCCG GTCTGCTGAC CTTTGGCGGT ATCGGCGGTA TCGCTGTTGG TATGGCGGGC
AAAGATGTCC TGAGCAATTT TTTCTCCGGT ATTATGCTCT ATTTCGATCG CCCCTTCAGT
ATCGGAGACT GGATTCGTTC TCCTGACAGA AATATCGAAG GTACGGTCGC CGAAATCGGC
TGGCGAATTA CGCGAATTAA CACATTCGAC CACCGCCCGT TGTACGTGCC TAATTCCGTC
TTTTCATCCA TTAGCGTTGA GAATCCGGGA CGGATGACCA ACCGTCGAAT AAAAACGGTT
ATTGGGTTAC GTTACGAAGA TGCCGACAAA ATTGGCCTCA TTGTTGACGC TATCAGAAAC
ATGTTGCAGG CGCACAGAGA TATCGATCAG AAACAGACGC TGTTGGTCTA TTTTAATGAA
TTCGCCGACT CTTCGCTGAA TATTATGGTG TATTGCTTTA CCAAAACAAC AGTATGGCAG
GAATGGCTTG CCGTACAGCA GGATGTTTAC CTGAAAATTA TTGCGATTGT CCAGGAAAAC
GGCGCTGACT TCGCCTTCCC AAGCCAGACG CTCTATATCG ATAATCCGGA GGCCGCGCCT
GCGATAAAAT AA
|
|---|
| Protein sequence | MFTEFFLKNA FNLAILFSCG MALLVVRFWL SRNVQWKKGF TFHAAQFFIY AIIIGTIGSI
LNNAIEDYNL RFISSGVIDF ICTSLIALIL TIKLFLIINQ FEKAQVNKGR DVTSTRILAR
VIKITIIVAI VLLYGEHFGM SLSGLLTFGG IGGIAVGMAG KDVLSNFFSG IMLYFDRPFS
IGDWIRSPDR NIEGTVAEIG WRITRINTFD HRPLYVPNSV FSSISVENPG RMTNRRIKTV
IGLRYEDADK IGLIVDAIRN MLQAHRDIDQ KQTLLVYFNE FADSSLNIMV YCFTKTTVWQ
EWLAVQQDVY LKIIAIVQEN GADFAFPSQT LYIDNPEAAP AIK
|
|---|
| |