Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1784 |
Symbol | uspE |
ID | 6482505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1751632 |
End bp | 1752579 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642737160 |
Product | universal stress protein UspE |
Protein accession | YP_002040912 |
Protein GI | 194444013 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.334213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 0.266242 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATGT ATCAAAATAT GCTGGTGGTC ATCGATCCCA ATCAGGACGA CCAACCCGCA TTACGGCGAG CAGTTTATTT GCATCAACGG ATTGGCGGCA AAATTAAAGC TTTCCTGCCT ATTTACGATT TCTCGTATGA GATGACCACC CTGCTTTCTC CTGACGAACG CACCGCAATG CGTCAGGGCG TAATAAGCCA ACGCACAGCC TGGATACGTG AGCAGGCGAA ATATTATCTT GAAGCCGGTG TCCCCATTGA AATTAAAGTG GTCTGGCACA ATCGTCCCTT TGAGGCCATC ATCCAGGAGG TTATCACCGG CAGTCACGAT CTGGTGTTGA AAATGGCGCA TCAGCACGAT CGACTGGAAG CGGTCATTTT TACCCCTACC GACTGGCATT TGCTGCGTAA ATGCCCAAGC CCCGTGTGGA TGGTCAAAGA TCAGCCGTGG CCAGAGGGCG GCAAAGCCCT GGTCGCCGTG AACCTGGCAA GCGAAGAGCC CTATCACAAT GCTCTCAACG AAAAGCTGGT AAAAGAGACC TTACAATTGG CGGAGCAGGT TAATCATACC GAAGTGCACC TGGTCGGCGC CTACCCCGTT ACGCCAATCA ATATCGCCAT TGAGCTGCCG GAATTTGATC CCAGCGTGTA TAACGACGCC ATCAGAGGCC AGCATTTACT GGCGATGAAA GCGCTGCGCC AGAAATTCAG CATCGATGAA AAAGTTACGC ATGTAGAAAA AGGCTTGCCT GAAGAAGTTA TCCCGGATCT TGCCGAACAT CTCCAGGCGG GGATCGTTGT GCTTGGCACC GTTGGACGTA CCGGACTCTC GGCCGCGTTT CTGGGGAACA CGGCCGAACA GGTCATTGAC CATCTGCGCT GCGACCTGTT AGTCATTAAG CCTGATGAGT ATCAAACACC GGTTGAACTG GACGACGAGG ACGATTAA
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Protein sequence | MAMYQNMLVV IDPNQDDQPA LRRAVYLHQR IGGKIKAFLP IYDFSYEMTT LLSPDERTAM RQGVISQRTA WIREQAKYYL EAGVPIEIKV VWHNRPFEAI IQEVITGSHD LVLKMAHQHD RLEAVIFTPT DWHLLRKCPS PVWMVKDQPW PEGGKALVAV NLASEEPYHN ALNEKLVKET LQLAEQVNHT EVHLVGAYPV TPINIAIELP EFDPSVYNDA IRGQHLLAMK ALRQKFSIDE KVTHVEKGLP EEVIPDLAEH LQAGIVVLGT VGRTGLSAAF LGNTAEQVID HLRCDLLVIK PDEYQTPVEL DDEDD
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