| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1781 |
|---|
| Symbol | |
|---|
| ID | 6486886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 1749197 |
|---|
| End bp | 1749760 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642737157 |
|---|
| Product | Smr protein/MutS2 |
|---|
| Protein accession | YP_002040909 |
|---|
| Protein GI | 194445994 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 0.188512 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTTG ACGATAAAGC GCTGTTTCTT GACGCCATGG AGGATGTCCA GCCGCTGAAA
CGCCATACTG ATGTACACTG GCAGCCAACG CGTAATCTTA AAACGCCCCA GCGTATCGAC
ACGCTTCAGC TTGATAATTT CCTGACGACG GGCTTTCTGG ATATTCTGCC GCTGAATGAA
CCGCTGGAAT TTCGTCGGGA AGGATTGCAG CAGGGTGTCA TCGACAAGTT ACGCAGTGGG
AAATACCCTC AGCAGGCCAG CCTCAATTTG TTACGCCAGC CGGTCGAAAC GTGCCGAAAA
ATGCTGTTTC GTTTTATCCT GGAGGCGCAG AAAGAGGGGT TGCGTAATGT CCTGATCATT
CATGGTAAAG GGCGAGAGGC GAAGTCGCAT GCCAATATCG TCCGAAGCTA TGTGGCCCGT
TGGTTGACAG AGTTTGAAGA TGTACAGGCT TATTGTTCGG CGCTGCCGCA CCATGGCGGC
GGCGGGGCAT GTTATGTCGC GTTACGTAAA ACAGTGCAGG CTAAACAGGA TAACTGGGAG
CGCCATGCGA AGCGTAGTCG GTAA
|
|---|
| Protein sequence | MNLDDKALFL DAMEDVQPLK RHTDVHWQPT RNLKTPQRID TLQLDNFLTT GFLDILPLNE
PLEFRREGLQ QGVIDKLRSG KYPQQASLNL LRQPVETCRK MLFRFILEAQ KEGLRNVLII
HGKGREAKSH ANIVRSYVAR WLTEFEDVQA YCSALPHHGG GGACYVALRK TVQAKQDNWE
RHAKRSR
|
|---|
| |