Gene SNSL254_A1757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1757 
Symbol 
ID6485224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp1726823 
End bp1727623 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content55% 
IMG OID642737136 
Producthypothetical protein 
Protein accessionYP_002040888 
Protein GI194443814 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.922526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.0972712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAA CGCCATTTCC GGCGCTCTCT GCGGAAACAT TGCTGGCGGT GAATACCGTC 
GGACAGTGGC TGGCGCAAAA TGATTTTTCC GGCGAACAAC CTTATTCGTC GGATTGCGTC 
GTCCTGGCGG GCAATGCGGT GATCCCCACT ATCGACGCGG CCTGTCGCAT CGCCAAAGCG 
CAAGGCGTTC CTTTACTGAT TAGCGGCGGT ATAGGTCATT CAACGCCGTT TTTGTACGCC 
GTGATTGCCC GGCATCCGCG CTACCATACT ATTCGCACAA GCGGACGCGC TGAAGCCGCG 
ATCCTCGCGG ATATCGCGAA CCAGTTCTGG CATATTCCGG CTGAGAAAAT TTGGCTGGAA 
GATCGGTCGA CTAATTGCGG CGAAAATGCC CGTTTCTCCT GCGCACTGAT CCGTCAGGCG 
AAAGAAAACA TTAACACGGC TATCGTTGTG CAAGACCCCA CCATGCAGCG GCGCACTATC 
GCGGCGTTTC GGCGCGTGAC AAACGACGAC ACCGATGCGC CGCGCTGGCT GAGTTTTCCT 
GGTTTTGTTC CGGTACTGCG CCACCTTAAT GGCGGTACAC GTTTTGCCAA TGTTGAAGAG 
GGCATCTGGA CGGTGGAGCG TTATCTGTCT CTGATTGCCG GCGAGCTGCC ACGTTTGCGT 
GACGATGAAA CAGGGTATGG ACCGCGCGGT AAAGATTTTA TCATTCACGT TGATATCCCA 
CGCGATATTG AAAACGCATG GCAGGTATTG CAGGCAGATA CGACGCTGCG CAGTGCGTTA 
GAACAGAGAG CGTTACGCTA A
 
Protein sequence
MNTTPFPALS AETLLAVNTV GQWLAQNDFS GEQPYSSDCV VLAGNAVIPT IDAACRIAKA 
QGVPLLISGG IGHSTPFLYA VIARHPRYHT IRTSGRAEAA ILADIANQFW HIPAEKIWLE 
DRSTNCGENA RFSCALIRQA KENINTAIVV QDPTMQRRTI AAFRRVTNDD TDAPRWLSFP 
GFVPVLRHLN GGTRFANVEE GIWTVERYLS LIAGELPRLR DDETGYGPRG KDFIIHVDIP 
RDIENAWQVL QADTTLRSAL EQRALR