Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1741 |
Symbol | |
ID | 6482271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 1714026 |
End bp | 1715144 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642737121 |
Product | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase |
Protein accession | YP_002040873 |
Protein GI | 194444996 |
COG category | [C] Energy production and conversion |
COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
TIGRFAM ID | [TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.103327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 0.361993 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCAC GTGCAGCAGT TGCTTTTGGT CCCGGTCAGC CGCTAAAAAT TGTCGAGATT GACGTTGCGC CGCCGAAAAA AGGCGAAGTT CTGGTCAAAA TCACCCATAC CGGCGTTTGC CATACCGATG CTTTTACCCT TTCCGGCGAT GATCCGGAAG GCGTATTCCC GGCAGTACTG GGTCACGAAG GCGGCGGCGT GGTAGTTGAG GTCGGCGAGG GGGTCGCCAG CCTGAAACCC GGCGACCATG TTATTCCACT ATACACGGCG GAATGCGGCG AGTGTAAGTT CTGTAAGTCC GGTAAAACTA ACCTTTGTCA GGCCGTACGC GCCACTCAGG GAAAAGGGCT GATGCCGGAT GGCACTACCC GCTTTTCTTA TAACGGCGAA CCCGTTTATC ACTATATGGG AACCAGCACG TTCAGCGAAT ATACCGTTTG CGCGGAAATT TCTCTGGCGA AAGTGAACCC GCAGGCGCCG CTGGATAAAG TGTGTCTGTT GGGCTGCGGC GTGACGACTG GTATTGGCGC TGTCCATAAC ACCGCTAAAG TCAAAGCGGG CGACACCGTT GCCGTTTTTG GTTTAGGCGG TATTGGGCTG GCGGTTATTC AGGGCGCGGT TCAGGCTAAA GCCGGGCGTA TTTTAGCTGT CGACACGAAT CCGGAAAAAT TTACGCTGGC GGGCGAAATG GGGGCCACGG ACTTTATTAA TCCGAATGAT TACGACAAAC CGATCCAGGA CGTTATTGTT GAGCTTACTG ATGGCGGCGT AGATTTCAGT TTTGAATGTA TCGGCAACGT TAACGTGATG CGAGCAGCGC TGGAATGTTG TCATAAAGGT TGGGGCGAAA GCATTATTAT TGGCGTAGCG GGAGCAGGGC AGGAAATCAA AACCCGTCCC TTCCAGCTAG TGACCGGTCG CGTCTGGCGT GGCTCCGCTT TTGGCGGCGT GAAAGGGCGC ACGCAGCTGC CAGGGATGGT AGAAGATGCG ATGAACGGTA AAATCCGTTT AGATCCTTTT ATTACTCACC GCCTGCCGCT GGAGCAGATT AACGATGCCT TTGAACTGAT GCATCAGGGT AAATCCATCC GCACTGTTAT CCACTTTGGC GATAACTGA
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Protein sequence | MKSRAAVAFG PGQPLKIVEI DVAPPKKGEV LVKITHTGVC HTDAFTLSGD DPEGVFPAVL GHEGGGVVVE VGEGVASLKP GDHVIPLYTA ECGECKFCKS GKTNLCQAVR ATQGKGLMPD GTTRFSYNGE PVYHYMGTST FSEYTVCAEI SLAKVNPQAP LDKVCLLGCG VTTGIGAVHN TAKVKAGDTV AVFGLGGIGL AVIQGAVQAK AGRILAVDTN PEKFTLAGEM GATDFINPND YDKPIQDVIV ELTDGGVDFS FECIGNVNVM RAALECCHKG WGESIIIGVA GAGQEIKTRP FQLVTGRVWR GSAFGGVKGR TQLPGMVEDA MNGKIRLDPF ITHRLPLEQI NDAFELMHQG KSIRTVIHFG DN
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