Gene SNSL254_A1735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1735 
Symbol 
ID6485033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp1705409 
End bp1705975 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content43% 
IMG OID642737115 
Producthypothetical protein 
Protein accessionYP_002040867 
Protein GI194443294 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.282306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA GCTTTCTTGG TGTTGTCCTG TCTCTGGGTT TATTAAGTGC TGCTCATGCA 
GATGTATATA AATTTGATAA TACGCATACC AATGCGGTAT TTAATATCGA TCATTTCCAG 
ACCTCAACCA ATCATGGCGG GTTTTATGCT ATTAGCGGCG AACTGAAATA TCAGCCGGAA 
AAGCAAGATG CAGAGATGCG CGTGACGATT CCCGTGAGCG CCTTAAATAC CGGGGTGGAT 
GCGTTTGATA ACCATATTCG CAGTAGCGAT ATTCTGGATG CGGAAAAATA TCCAGAAATG 
GTATTTAAAT CAACAAAATG GCATTTTGAA GATAATAAAC CGGTTTCTAT TGACGGTTTG 
CTAACAATGA AGGGAGTAAC GAAGCCCGTC ACCTTAACCA CCACCAAGTT TGGCTGTTAT 
ATGAGCCCGA TATTCAAGGC GCAGGTTTGC GGTGGTGATT TTGTCACGCA AATAGATCGC 
ACCCAGTGGG GGGTAGATTA TCTGGTCGAT ATGGGGATGA CGAAAGTTGT CGATATAAAA 
ATCCAGGCAG AAGCGGTTAA GCAATAA
 
Protein sequence
MKKSFLGVVL SLGLLSAAHA DVYKFDNTHT NAVFNIDHFQ TSTNHGGFYA ISGELKYQPE 
KQDAEMRVTI PVSALNTGVD AFDNHIRSSD ILDAEKYPEM VFKSTKWHFE DNKPVSIDGL 
LTMKGVTKPV TLTTTKFGCY MSPIFKAQVC GGDFVTQIDR TQWGVDYLVD MGMTKVVDIK 
IQAEAVKQ