Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1734 |
Symbol | |
ID | 6484166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 1704195 |
End bp | 1705397 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642737114 |
Product | L-lactate oxidase |
Protein accession | YP_002040866 |
Protein GI | 194444997 |
COG category | [C] Energy production and conversion |
COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.613324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTC ATCACCTCAT TCGGGTAGTG GCCTCGCTGG TAATGTTGGC AACATCAGGC CTGGCTTATG CTGAAGAGTA CAAAGCCAGC ACGGACGAAA AAGCAATAAA AATGACGAAC GTAGCCTCTC TGGAAGCACG CGTTCAGGCC AGAATGGAGA AAGGGGCATT TGGTTATATT CGCGGTGGAG CCGAAGATGA GAATAACCTT CGCAGCAACA CCGAAAGCTT TGACAAAAAA TATATTATGC CGCGCGTATT ACAGGGCATT GAGTTAAAAG AGATCGATTT ATCAACGCAG CTACTGGGTA TTCCGCTTAA AACGCCTATA ATCCAGGCAC CGATGGCGGC GCAGGGCCTG GCCCACGCCT CCGGAGAGTT GGCGACGGCG AAAGGCATGG CGCAGGTCGG TTCGATTTTC TCGTTGAGCA CCTATGGCAA CAAGACCATC GAAGAGGTGG CTAACGTTTC CGGGAAAAAT CCGTTCTTCT TCCAGCTTTA TATGAGTAAG AATAATCAAT TTAACGAATT TATTCTTGCA CAAGCGGTAA AGCATGGCGC TAAAGCGATT ATTCTGACCG TAGATTCGCC TGTCGGTGGT TATCGGGAAG AAGATATTAA AAATAACTTC CAGTTCCCGT TGGGCTTTGC AAACCTGGAA ATGTTCGCCA GAAAAAATGA CGATGGTTCA AAAACCGGCA AAGGGGCAGG GATAAGTGAA ATTTACGCGC AGGCTAAACA AGCCTTTACG CCGGAGGATA TTGCCTATGT ACATCGTATT TCCGGTCTGC CGGTTATCGT AAAAGGCATT CAGTCGCCGG AGGATGCTGA AATTGCTATC CAGGCCGGAG CCGCAGGAAT ATGGGTTTCT AATCATGGTG GTCGTCAATT AGACAGCGGG CCGTCCTCAT TCGATATGCT TCCTGCGATT GCAAAAGTCG TCAACAAGCG AGTGCCTGTT ATTTTTGACA GTGGAGTACG CCGTGGCTCG CACGTATTCA AAGCGTTAGC CAGCGGGGCG GATATTGTGG CGGTTGGCCG GCCTGTATTA TACGGTCTTA ATCTTGGCGG CGCTCAGGGT GTGGCATCAG TGATTGAACA GCTAAACAAA GAGCTGACAA TTAACATGAT GTTGGGTGGC GCCAGGAATA TTGAACAAGT GAAAACGACA CGCTTGTTAA CTGAAAAAGA GCTGCCCCAG TAA
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Protein sequence | MKTHHLIRVV ASLVMLATSG LAYAEEYKAS TDEKAIKMTN VASLEARVQA RMEKGAFGYI RGGAEDENNL RSNTESFDKK YIMPRVLQGI ELKEIDLSTQ LLGIPLKTPI IQAPMAAQGL AHASGELATA KGMAQVGSIF SLSTYGNKTI EEVANVSGKN PFFFQLYMSK NNQFNEFILA QAVKHGAKAI ILTVDSPVGG YREEDIKNNF QFPLGFANLE MFARKNDDGS KTGKGAGISE IYAQAKQAFT PEDIAYVHRI SGLPVIVKGI QSPEDAEIAI QAGAAGIWVS NHGGRQLDSG PSSFDMLPAI AKVVNKRVPV IFDSGVRRGS HVFKALASGA DIVAVGRPVL YGLNLGGAQG VASVIEQLNK ELTINMMLGG ARNIEQVKTT RLLTEKELPQ
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