Gene SNSL254_A1730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1730 
Symbol 
ID6486658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1701823 
End bp1702260 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content57% 
IMG OID642737110 
ProductPTS system sugar-specific transproter subunit EIIA 2 
Protein accessionYP_002040862 
Protein GI194446117 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0365053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAATG ATGTTAAGTG GGTTCAGGCG CAACGCCATG CCAGCGACTG GCGACACGCG 
CTAGATATCG CCGTCCGTCC GCTGATTACC TTCGGCGCGG CGGCCCCCTG CTACCTGGAC
GGTATTATTG AGAACACCCT TAAATGGGGG CCATATTATC TTATCGCGCC GGGGATTGCG
CTGCCCCATG CCAGACCGGA GCAAGGCGCC AACCATAATC AAATCAGCGT CACTACGTTA
TCAACGCCGG TCGCTTTCGG CAATGCGGAT TGCGATCCCA TCTGGCTGTT GCTTTGCGCC
AGCGCCACGG ATGCCGAAGC ACATATTCGC ACCATTCAAC GCATCAGCCA GTGGCTCGAC
TCTCCAGAAA GCGTCGCGAT GCTGCAAGAT GCGCCAAATG ATGCCGCGCT TTTCGCGCAG
TTAACCGCAT TGCGCTGA
 
Protein sequence
MINDVKWVQA QRHASDWRHA LDIAVRPLIT FGAAAPCYLD GIIENTLKWG PYYLIAPGIA 
LPHARPEQGA NHNQISVTTL STPVAFGNAD CDPIWLLLCA SATDAEAHIR TIQRISQWLD
SPESVAMLQD APNDAALFAQ LTALR