Gene SNSL254_A1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1720 
Symbol 
ID6486041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1692659 
End bp1693837 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content57% 
IMG OID642737100 
Productbenzoate transporter 
Protein accessionYP_002040852 
Protein GI194446451 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3135] Uncharacterized protein involved in benzoate metabolism 
TIGRFAM ID[TIGR00843] benzoate transporter 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTGT TATCACTGCC GTTACCTACT GTATTATCTG GTCTGGTCGC CGTTCTGGTC 
GGCTATGCGA GTTCCGCCGC CATTATCTGG CAGGCGGCGC TTGCCGCTGG CGCAACACCC
ACAGAGATCG CCGGCTGGAT GACCGCCCTC GGTATAGCCA TGGGCATAAG CACACTAACG
TTAACCTTGT GGTATCGTGC GCCGGTTTTA ACCGCTTGGT CAACGCCTGG TGCCGCCCTG
TTGGTAACAG GGCTTCAGGG ATTATCGTTG CCAGACGCCG TGGGCATATT CATTGTCGCC
AATGCCCTGA TTGTGCTGTG CGGCGTCACG GGATTGTTTG CGCGTTTGAT GCGGATAATC
CCCCATTCTC TTGCCGCTGC AATGCTGGCG GGAATACTGC TACGCTTCGG CCTGCAGGCG
TTCGGGACGC TCAATGGAGA ATTTGTCATG TGCGGCGGTA TGCTATTGGC GTGGCTACTC
TTTAAAGTAT TCGCGCCCCG CTATGCCGTT ATTGCTGCCA TGGTGATGGG AATAACGGTG
GCGCTCATCC AGGGTAAGGT GGCGATGAGC GGTATTCATT TCGCGCCGGT GTGGCCCACC
TTCGTTCCCC CCCACTTTTC ATTCGCTCAA AGCCTGAGCG TCGCGGTACC GCTCTTCCTG
GTGACGATGG CATCGCAAAA CGCCCCCGGC GTCGCCACAA TGAAGGCGTC TGGCTATCAG
CTTCCTGTCT CTCCGTTAAT GATTTTTACC GGATTGCTGG CGCTGCTGCT TTCGCCATTT
GGCGTTTATT CTATCTGCAT TGCCGCCATT ACAGCCGCCA TTTGTCAAAG CCCGGACGCG
CACCCCGATC CAACGCGTCG CTGGTTAGCG GCCGCCGCCG CAGGCGTTTT TTATTTACTT
GCCGGGTGGT TTGGCGGTTC GATAACCGGG CTGATGGTCG CCCTGCCGGT TAGCTGGGTG
CAAATGCTGG CTGGTCTGGC ACTGTTAAGT ACGATTAGCG GTAGCCTGTA TCAGGCGCTT
ACTCACGAAA GTGAGCGTGA CGCGGCAGTT ATCGCATTTC TCGTCACCGC CAGCGGGCTA
ACGCTGATGG GCATCGGATC GGCATTCTGG GGGTTGATCG CTGGCGGGAT AGGCTATGCA
GTATTAACGA GAACGCGCCG CCCATCGTTG TCTGGCTGA
 
Protein sequence
MRLLSLPLPT VLSGLVAVLV GYASSAAIIW QAALAAGATP TEIAGWMTAL GIAMGISTLT 
LTLWYRAPVL TAWSTPGAAL LVTGLQGLSL PDAVGIFIVA NALIVLCGVT GLFARLMRII
PHSLAAAMLA GILLRFGLQA FGTLNGEFVM CGGMLLAWLL FKVFAPRYAV IAAMVMGITV
ALIQGKVAMS GIHFAPVWPT FVPPHFSFAQ SLSVAVPLFL VTMASQNAPG VATMKASGYQ
LPVSPLMIFT GLLALLLSPF GVYSICIAAI TAAICQSPDA HPDPTRRWLA AAAAGVFYLL
AGWFGGSITG LMVALPVSWV QMLAGLALLS TISGSLYQAL THESERDAAV IAFLVTASGL
TLMGIGSAFW GLIAGGIGYA VLTRTRRPSL SG