Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1720 |
Symbol | |
ID | 6486041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1692659 |
End bp | 1693837 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642737100 |
Product | benzoate transporter |
Protein accession | YP_002040852 |
Protein GI | 194446451 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3135] Uncharacterized protein involved in benzoate metabolism |
TIGRFAM ID | [TIGR00843] benzoate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCTGT TATCACTGCC GTTACCTACT GTATTATCTG GTCTGGTCGC CGTTCTGGTC GGCTATGCGA GTTCCGCCGC CATTATCTGG CAGGCGGCGC TTGCCGCTGG CGCAACACCC ACAGAGATCG CCGGCTGGAT GACCGCCCTC GGTATAGCCA TGGGCATAAG CACACTAACG TTAACCTTGT GGTATCGTGC GCCGGTTTTA ACCGCTTGGT CAACGCCTGG TGCCGCCCTG TTGGTAACAG GGCTTCAGGG ATTATCGTTG CCAGACGCCG TGGGCATATT CATTGTCGCC AATGCCCTGA TTGTGCTGTG CGGCGTCACG GGATTGTTTG CGCGTTTGAT GCGGATAATC CCCCATTCTC TTGCCGCTGC AATGCTGGCG GGAATACTGC TACGCTTCGG CCTGCAGGCG TTCGGGACGC TCAATGGAGA ATTTGTCATG TGCGGCGGTA TGCTATTGGC GTGGCTACTC TTTAAAGTAT TCGCGCCCCG CTATGCCGTT ATTGCTGCCA TGGTGATGGG AATAACGGTG GCGCTCATCC AGGGTAAGGT GGCGATGAGC GGTATTCATT TCGCGCCGGT GTGGCCCACC TTCGTTCCCC CCCACTTTTC ATTCGCTCAA AGCCTGAGCG TCGCGGTACC GCTCTTCCTG GTGACGATGG CATCGCAAAA CGCCCCCGGC GTCGCCACAA TGAAGGCGTC TGGCTATCAG CTTCCTGTCT CTCCGTTAAT GATTTTTACC GGATTGCTGG CGCTGCTGCT TTCGCCATTT GGCGTTTATT CTATCTGCAT TGCCGCCATT ACAGCCGCCA TTTGTCAAAG CCCGGACGCG CACCCCGATC CAACGCGTCG CTGGTTAGCG GCCGCCGCCG CAGGCGTTTT TTATTTACTT GCCGGGTGGT TTGGCGGTTC GATAACCGGG CTGATGGTCG CCCTGCCGGT TAGCTGGGTG CAAATGCTGG CTGGTCTGGC ACTGTTAAGT ACGATTAGCG GTAGCCTGTA TCAGGCGCTT ACTCACGAAA GTGAGCGTGA CGCGGCAGTT ATCGCATTTC TCGTCACCGC CAGCGGGCTA ACGCTGATGG GCATCGGATC GGCATTCTGG GGGTTGATCG CTGGCGGGAT AGGCTATGCA GTATTAACGA GAACGCGCCG CCCATCGTTG TCTGGCTGA
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Protein sequence | MRLLSLPLPT VLSGLVAVLV GYASSAAIIW QAALAAGATP TEIAGWMTAL GIAMGISTLT LTLWYRAPVL TAWSTPGAAL LVTGLQGLSL PDAVGIFIVA NALIVLCGVT GLFARLMRII PHSLAAAMLA GILLRFGLQA FGTLNGEFVM CGGMLLAWLL FKVFAPRYAV IAAMVMGITV ALIQGKVAMS GIHFAPVWPT FVPPHFSFAQ SLSVAVPLFL VTMASQNAPG VATMKASGYQ LPVSPLMIFT GLLALLLSPF GVYSICIAAI TAAICQSPDA HPDPTRRWLA AAAAGVFYLL AGWFGGSITG LMVALPVSWV QMLAGLALLS TISGSLYQAL THESERDAAV IAFLVTASGL TLMGIGSAFW GLIAGGIGYA VLTRTRRPSL SG
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