Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1719 |
Symbol | |
ID | 6484645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 1692031 |
End bp | 1692567 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642737099 |
Product | XRE family transcriptional regulator |
Protein accession | YP_002040851 |
Protein GI | 194445981 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.499876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAACC TGACACACTA TCTGGCGACC ACGTTAAGAA CGTTACGCCA TCAGCGAGGC TGGAGTTTAT CGCGTCTGGC GGAGATCTCC GGCGTCTCAA AAGCCATGTT GGGGCAGATA GAGCGTAATG AATCCAGTCC GACAGTCGCA ACGCTGTGGA AAATTGCGAC GGGCCTGAAC GTTCCATTCT CAATGTTTAT TTCGCCTCCG CAGGCCGAAT TTCCGCCAAC CTTCGATCCC CAGCAGCAAG CGATGGTAAT CACACCGTTG TTTCCGTGGG ACCCTGAACT CTGTTTTGAC TATTTTTCCC TATTGCTGGC GCCTGGCGCG GTCAGCGAAT CAACGCCGCA TAAAGCCGGC GTTGTCGAAC ATGTGGTGGT GATTCAGGGT CGGCTGGACA TGTGTACTGG TGGGGTATGG CAAACCATAG ACGCCGGTAA AGGATTGCGT TTTGCCGGCG ATACGGCGCA TACCTATTGC AACAGCAGTG ACCAGACGGT TCATTTTCAC TCGCTGATCC ATTACCCACG TGATTAA
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Protein sequence | MDNLTHYLAT TLRTLRHQRG WSLSRLAEIS GVSKAMLGQI ERNESSPTVA TLWKIATGLN VPFSMFISPP QAEFPPTFDP QQQAMVITPL FPWDPELCFD YFSLLLAPGA VSESTPHKAG VVEHVVVIQG RLDMCTGGVW QTIDAGKGLR FAGDTAHTYC NSSDQTVHFH SLIHYPRD
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