Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1706 |
Symbol | |
ID | 6484456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1675206 |
End bp | 1675655 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642737086 |
Product | inner membrane protein YdcZ |
Protein accession | YP_002040838 |
Protein GI | 194445063 |
COG category | [S] Function unknown |
COG ID | [COG3238] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.899294 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAGT CGCTGACGCT TATCTTTTTG ATCGCCGCCG GCGTCGGGCT GGTGGTACAA AACAGTATTA TGGTGCGTAT TACGCAGACA TCATCGACGA TTCTGATCGC TATGCTGTTG AACTCGCTGG TAGGGATCAT TTTATTTGTG ACGATATTGT GGTTTAAGCA AGGCGCTACG GGCTTCGGCG AGCTGGTCGC CAGCGTTCGC TGGTGGACAT TGATCCCCGG TTTGCTGGGG TCATTTTTTG TATTTGCCAG CATTAGCGGG TATCAGAACG TTGGCGCCGC GACGACTATC GCGGTACTGG TCGCCAGCCA GTTAATCGGC GGACTGGCGC TGGATATCGC GCGTAGCCAC GGCGTCACGT TACGCGCAAT GGTCGGGCCG GCGTTTGGCG CGCTGTTGCT GGTCATTGGC GCATGGCTGA TTGCGAAGCG CCAGTTTTAA
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Protein sequence | MNQSLTLIFL IAAGVGLVVQ NSIMVRITQT SSTILIAMLL NSLVGIILFV TILWFKQGAT GFGELVASVR WWTLIPGLLG SFFVFASISG YQNVGAATTI AVLVASQLIG GLALDIARSH GVTLRAMVGP AFGALLLVIG AWLIAKRQF
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