Gene SNSL254_A1706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1706 
Symbol 
ID6484456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1675206 
End bp1675655 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content55% 
IMG OID642737086 
Productinner membrane protein YdcZ 
Protein accessionYP_002040838 
Protein GI194445063 
COG category[S] Function unknown 
COG ID[COG3238] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.899294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGT CGCTGACGCT TATCTTTTTG ATCGCCGCCG GCGTCGGGCT GGTGGTACAA 
AACAGTATTA TGGTGCGTAT TACGCAGACA TCATCGACGA TTCTGATCGC TATGCTGTTG
AACTCGCTGG TAGGGATCAT TTTATTTGTG ACGATATTGT GGTTTAAGCA AGGCGCTACG
GGCTTCGGCG AGCTGGTCGC CAGCGTTCGC TGGTGGACAT TGATCCCCGG TTTGCTGGGG
TCATTTTTTG TATTTGCCAG CATTAGCGGG TATCAGAACG TTGGCGCCGC GACGACTATC
GCGGTACTGG TCGCCAGCCA GTTAATCGGC GGACTGGCGC TGGATATCGC GCGTAGCCAC
GGCGTCACGT TACGCGCAAT GGTCGGGCCG GCGTTTGGCG CGCTGTTGCT GGTCATTGGC
GCATGGCTGA TTGCGAAGCG CCAGTTTTAA
 
Protein sequence
MNQSLTLIFL IAAGVGLVVQ NSIMVRITQT SSTILIAMLL NSLVGIILFV TILWFKQGAT 
GFGELVASVR WWTLIPGLLG SFFVFASISG YQNVGAATTI AVLVASQLIG GLALDIARSH
GVTLRAMVGP AFGALLLVIG AWLIAKRQF