Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1705 |
Symbol | yncA |
ID | 6486210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1674691 |
End bp | 1675206 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642737085 |
Product | phosphinothricin acetyltransferase |
Protein accession | YP_002040837 |
Protein GI | 194444449 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.667334 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATTC GCTTTGCCGA TAAAGCAGAC TGCGCCGCGA TTACCGAAAT CTATAACCAT GCGGTATTAC ATACTGCGGC TATCTGGAAC GATCGGACGG TCGATACGGA TAATCGCCTT GCCTGGTATG AGGCCCGTCA ATTACTGGGC TATCCGGTGC TGGTAAGCGA AGAAAATGGC GTGGTGACTG GCTATGCATC ATTTGGCGAC TGGCGCAGTT TCGACGGTTT TCGCTATACC GTCGAGCACT CGGTTTATGT CCATCCGGCG CACCAGGGGA AAGGACTGGG GCGAAAACTG CTCAGCAGAC TGATCGATGA AGCCCGACGC TGCGGCAAGC ATGTGATGGT GGCCGGTATT GAGTCACAGA ATGCCGCCTC GATACGCCTG CATCATTCGC TGGGGTTTAC CGTCACCGCG CAAATGCCGC AGGTCGGCGT AAAATTTGGC CGTTGGTTAG ATCTTACGTT TATGCAGCTC CAGCTTGATG AACACGCCGC GCCGGACGCC TGCTGA
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Protein sequence | MTIRFADKAD CAAITEIYNH AVLHTAAIWN DRTVDTDNRL AWYEARQLLG YPVLVSEENG VVTGYASFGD WRSFDGFRYT VEHSVYVHPA HQGKGLGRKL LSRLIDEARR CGKHVMVAGI ESQNAASIRL HHSLGFTVTA QMPQVGVKFG RWLDLTFMQL QLDEHAAPDA C
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