Gene SNSL254_A1704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1704 
Symbol 
ID6484173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1673429 
End bp1674466 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content54% 
IMG OID642737084 
Productputative NADP-dependent oxidoreductase yncb 
Protein accessionYP_002040836 
Protein GI194446145 
COG category[R] General function prediction only 
COG ID[COG2130] Putative NADP-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAC AGACCAACCG AAATCGTCGT TGGGTTTTGG CCTCGCGTCC CCACGGCGCG 
CCGCAGATGG ATAACTTCCG CCTCGAAGAA GATGACGTCG CGACGCCCGG TGAAGGGCAG
GTGCTATTGC GTACCGTTTT TTTATCACTC GACCCTTATA TGCGTGGCCG CATGAGCGAT
GAACCCTCTT ATGCGCCGCC TGTTGAACCT GGCTGCGTTA TGGTTGGCGG TACGGTCAGT
CGCGTTGTCG CGTCGAACCA TCCTGATTAC CGACCAGACG AATGGGTGTT GAGTTACAAT
GGCTGGCAGG ATTATGACAT TTCAGATGGC GAAGGGTTGG TAAAGCTGGG TGATAATCCG
CAACATCCTT CCTGGTCGTT GGGAGTTTTA GGGATGCCGG GGTTTACCGC CTATATGGGG
TTACTGGATA TCGGCCAGCC GAAAGAGGGC GAAACGCTGG TTGTCGCCGC CGCCACTGGC
CCCGTAGGCG CAACGGTTGG ACAAATTGGC AAGCTGAAGG GCTGCCGGGT CGTGGGTATT
GCCGGCGGCG CGGAAAAATG CCGTCATGCG ACAGACGTTT TGGGATTTGA TCTGTGCCTT
GATCATCACG CTGATAATTT CCCACAACAG CTTGCGCAGG CCTGCCCGCA GGGTATCGAT
ATCTATTATG AGAATGTCGG TGGTAAAGTC TTTGACGCCG TCTTACCGCT ACTGAATACG
TCGGCGCGAA TTCCGCTCTG CGGTCTGGTC AGCGGCTACA ATGCGACAGC GTTGCCGGAC
GGTCCAGACA GACTGCCTCT GCTGATGGCG ACATTACTTA AAAAGCGTAT TCGCCTGCAA
GGTTTTATCA TCAACCAGGA CTATGGTCAC CGGATACATG AGTTTCAGCA AGAAATGGGG
CGTTGGATCA AAGAAGGGAA AATACATTAC CGGGAGCAGA TTACTGATGG GCTGGAAAAT
GCGCCAGAAG CGTTTATGGG GCTGCTGGCG GGGAAGAACT TTGGCAAAGT CGTGATACGT
TTAGCGGACG ATGCGTAA
 
Protein sequence
MKQQTNRNRR WVLASRPHGA PQMDNFRLEE DDVATPGEGQ VLLRTVFLSL DPYMRGRMSD 
EPSYAPPVEP GCVMVGGTVS RVVASNHPDY RPDEWVLSYN GWQDYDISDG EGLVKLGDNP
QHPSWSLGVL GMPGFTAYMG LLDIGQPKEG ETLVVAAATG PVGATVGQIG KLKGCRVVGI
AGGAEKCRHA TDVLGFDLCL DHHADNFPQQ LAQACPQGID IYYENVGGKV FDAVLPLLNT
SARIPLCGLV SGYNATALPD GPDRLPLLMA TLLKKRIRLQ GFIINQDYGH RIHEFQQEMG
RWIKEGKIHY REQITDGLEN APEAFMGLLA GKNFGKVVIR LADDA