| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1696 |
|---|
| Symbol | |
|---|
| ID | 6483617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 1663779 |
|---|
| End bp | 1664672 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642737076 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002040828 |
|---|
| Protein GI | 194444446 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0384] Predicted epimerase, PhzC/PhzF homolog |
|---|
| TIGRFAM ID | [TIGR00654] phenazine biosynthesis protein PhzF family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 0.778607 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCGC AGATTTACCA TGTTGACGCC TTCACCAGCG AACCCTTTCG CGGCAACTCT
GCTGGCGTTG TCTTACATGC GGATACGCTA AGCGACGCGC AGATGCAGCT GATTGCCCGT
GAACTTCGTC ACTCGGAAAC CGCCTTTTTG CTAAAAAGCG AAGAGAGTGA TGTGCGCATA
CGCTACTTTA CACCGACAGT AGAAGTCCCC ATCTGTGGTC ATGCCACCGT GGCCGCGCAT
TATGTTCGGG CAACGGTACT GGGGTTGGGA AACACCACCG TCTGGCAAAC CTCGTTAGCG
GGCCGTCATC GCGTTGAAAT TCATGCCGAA CACAACGACT ATCGCATCAC GCTGGAACAA
GGTCAGCCCT CTTTTGAACC ACCGCTAGTC GGAGAGATTC GGGCTGCCAT CATCACCGCA
CTGAACCTGA CTGAAGATGA TATCGTGCCG GGAGCGCCAA TTCAGGTGGC TTCAACAGGA
CATGCAAAAG TGATGATCCT GCTCAAACCA GACGTTGATA TTGATGCCCT TTCTCCGAAT
CTGGCAGCCC TGACGGCAAT CAGCCAGCAA ATTGGCTGTA ACGGCTTTTT TCCTTTCCAG
ATTCGTCCGG GAAAAAACGA AACCGATGGG CGAATGTTTT CCCCGGCGAT AGGAATTGTG
GAAGATCCGG TAACGGGAAA CGCCAATGGC CCGATGGGGG CATGGCTCGT CCATCATGGC
CTGATGGCGC ATGACGGTAA AACGCTGCAG ATTCAAGGCC ATCAGGGGCG CGCTTTAGGC
AAAGAGGGTA CTGTTGATGT TACCGTCACC ATTCGCGATA ACCAGCCGGA AAACGTCACC
ATCTCCGGCC AGGCGGTCAT TCTGTTTCAT GCCGAATGGG CCATTACTTT TTAA
|
|---|
| Protein sequence | MKPQIYHVDA FTSEPFRGNS AGVVLHADTL SDAQMQLIAR ELRHSETAFL LKSEESDVRI
RYFTPTVEVP ICGHATVAAH YVRATVLGLG NTTVWQTSLA GRHRVEIHAE HNDYRITLEQ
GQPSFEPPLV GEIRAAIITA LNLTEDDIVP GAPIQVASTG HAKVMILLKP DVDIDALSPN
LAALTAISQQ IGCNGFFPFQ IRPGKNETDG RMFSPAIGIV EDPVTGNANG PMGAWLVHHG
LMAHDGKTLQ IQGHQGRALG KEGTVDVTVT IRDNQPENVT ISGQAVILFH AEWAITF
|
|---|
| |