Gene SNSL254_A1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1682 
Symbol 
ID6483070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1645229 
End bp1645885 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content48% 
IMG OID642737064 
Productformate dehydrogenase-N subunit gamma 
Protein accessionYP_002040816 
Protein GI194445734 
COG category[C] Energy production and conversion 
COG ID[COG2864] Cytochrome b subunit of formate dehydrogenase 
TIGRFAM ID[TIGR01583] formate dehydrogenase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.798131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGT CGAAAATGAT TGTGCGCACG AAATTTGTCG ACCGCGCCTG TCACTGGACG 
GTGGTGATCT GCTTCTTCCT GGTAGCGCTG TCGGGAATTT CGTTTTTCTT CCCGACGCTA
CAATGGCTGA CGCAAACCTT CGGCACGCCG CAGATGGGAC GTATTTTGCA CCCGTTCTTC
GGTATTGCCA TTTTCATCGC GCTGATGTTT ATGTTCGTGC GTTTCGTCCA CCACAACATC
CCGGATAAAA AAGATATTCC GTGGCTGAAA AATATTGTCG AAGTATTGAA AGGCAATGAG
CATAAGGTGG CGGATGTCGG TAAATACAAT GCCGGACAGA AGATGATGTT CTGGTCCATT
ATGAGCATGA TTTTTGTGCT GCTGGTGACT GGCGTGATTA TCTGGCGTCC GTATTTCGCG
CAGTATTTCC CCATGCAGGT GGTGCGTTAT AGCCTGTTAA TTCATGCGGC GGCGGGCATT
ATTTTAATGC ACGCGATCCT CATCCATATG TATATGGCGT TTTGGGTGAA AGGCTCGATT
AAAGGCATGA TCGAAGGGAA GGTCAGCCGT CGCTGGGCGA AGAAACATCA TCCACGCTGG
TATCGTGAAA TCGAGAAGGC GGAAGCAAAA AAAGAGACCG AAGAAGGTAT TCAGTAA
 
Protein sequence
MSKSKMIVRT KFVDRACHWT VVICFFLVAL SGISFFFPTL QWLTQTFGTP QMGRILHPFF 
GIAIFIALMF MFVRFVHHNI PDKKDIPWLK NIVEVLKGNE HKVADVGKYN AGQKMMFWSI
MSMIFVLLVT GVIIWRPYFA QYFPMQVVRY SLLIHAAAGI ILMHAILIHM YMAFWVKGSI
KGMIEGKVSR RWAKKHHPRW YREIEKAEAK KETEEGIQ