Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1682 |
Symbol | |
ID | 6483070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 1645229 |
End bp | 1645885 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642737064 |
Product | formate dehydrogenase-N subunit gamma |
Protein accession | YP_002040816 |
Protein GI | 194445734 |
COG category | [C] Energy production and conversion |
COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
TIGRFAM ID | [TIGR01583] formate dehydrogenase, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.798131 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAGT CGAAAATGAT TGTGCGCACG AAATTTGTCG ACCGCGCCTG TCACTGGACG GTGGTGATCT GCTTCTTCCT GGTAGCGCTG TCGGGAATTT CGTTTTTCTT CCCGACGCTA CAATGGCTGA CGCAAACCTT CGGCACGCCG CAGATGGGAC GTATTTTGCA CCCGTTCTTC GGTATTGCCA TTTTCATCGC GCTGATGTTT ATGTTCGTGC GTTTCGTCCA CCACAACATC CCGGATAAAA AAGATATTCC GTGGCTGAAA AATATTGTCG AAGTATTGAA AGGCAATGAG CATAAGGTGG CGGATGTCGG TAAATACAAT GCCGGACAGA AGATGATGTT CTGGTCCATT ATGAGCATGA TTTTTGTGCT GCTGGTGACT GGCGTGATTA TCTGGCGTCC GTATTTCGCG CAGTATTTCC CCATGCAGGT GGTGCGTTAT AGCCTGTTAA TTCATGCGGC GGCGGGCATT ATTTTAATGC ACGCGATCCT CATCCATATG TATATGGCGT TTTGGGTGAA AGGCTCGATT AAAGGCATGA TCGAAGGGAA GGTCAGCCGT CGCTGGGCGA AGAAACATCA TCCACGCTGG TATCGTGAAA TCGAGAAGGC GGAAGCAAAA AAAGAGACCG AAGAAGGTAT TCAGTAA
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Protein sequence | MSKSKMIVRT KFVDRACHWT VVICFFLVAL SGISFFFPTL QWLTQTFGTP QMGRILHPFF GIAIFIALMF MFVRFVHHNI PDKKDIPWLK NIVEVLKGNE HKVADVGKYN AGQKMMFWSI MSMIFVLLVT GVIIWRPYFA QYFPMQVVRY SLLIHAAAGI ILMHAILIHM YMAFWVKGSI KGMIEGKVSR RWAKKHHPRW YREIEKAEAK KETEEGIQ
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