| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1672 |
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| Symbol | glgX |
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| ID | 6484353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 1632395 |
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| End bp | 1634470 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642737054 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_002040806 |
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| Protein GI | 194444960 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.574762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAA ACAGGGCTTT TGAAATCAGA TCAGGATACA GCCATACGCT TGGCGCAAAT
TATGACGGCG AAGGCGTGAA TTTCGCTATT TTTTCCGCCC ATGCGGAACG CGTCGAGCTT
TGTCTTTACG ATCCGAGCGG GGAGCATGAA ATCGCTCGTC TGGAGTTACC GGAATATACC
GACGAAATAT GGCACGGCTA TGTCCCGAAG TTGCAGCCCG GCGCGCTGTA TGGGTACCGC
GTTTACGGTC CTTATGACCC GGAAAATGGT CATCGTTTTA ACCCCAATAA GCTGCTTATT
GACCCTTATG CCCGTGAACT GGTGGGCGAT ATTCAGTGGA ACGATGCGCA TTTCGCATAT
CAATTACTTC ATGACGATAA AGATTTGACC TTTGATGACC AGGATAGCGC GCCATTTACG
CCTAAATGCC GGGTGATTGA TCCGGATGAG GCTAACTGGG AGGATAGACA ACGGCCTTCC
ATACCGTGGT CGAACGCCAT TATTTATGAA ACGCATGTAA AAGGCTTTAC CCAGCTTAAT
TCCGCGATCC CTGAGCCTCT ACGCGGTACG TTTGAAGGCA TGGGGCATAA AGCCAGCGTG
GATTACATTA AAAGTCTGGG GATTACCTCC GTCGAGCTTT TACCCGTTCA CTGGTTCCCG
GACGATCAGC ATCTGCTCGA TAAAGGACTG AAAAATTTCT GGGGATACAA CTCGCTGGGC
TTTTTTGCGC CGGCGACGCG CTACTATGGT CCAAAAGGTA TTCAGGGATT CCGCGATATG
GTGCGCGCTT TCCATGATGC CGGCATCGAA GTGATACTGG ATGTGGTCTA TAACCATACG
GCAGAAGGAA ATGAACTTGG CCCCACGCTG TCATTCAAAG GTATCGATAA CTTCTCTTAC
TATCGCACCA TGCCCGATCA GCATCGCTAT TACATTAACG ATACAGGGAC AGGTAATACC
GTCAATACCT CTCATCCACG GGTACTGCAA ATGGTGATGG ATTCCCTTCG CTATTGGGCG
GAGTCAATGC ATGTCGACGG CTTTCGTTTT GATTTGGGCA CCATTCTTGG TCGTGAGCCG
GAAGGCTTTG ATCAGAGAGG CGGCTTTTTT GATGCGGTAA CGCAAGACCC GGTGCTGGCA
AAACTGAAAC TGATTGGCGA ACCCTGGGAT ATCGGACCGG GCGGCTATCA GGTTGGCGGC
TTTCCACCAG GGTGGGGCGA ATGGAATGAT AAATACCGCG ATACGGTACG CGAATACTGG
AAAGGTGACA ACGTCACAAA TGATTTCGCC GCACGCCTGC TGGGTTCCGG CGATCTCTAT
GATTTGCGCG GCCGTCGCCC CTGGTCAAGC GTTAACTTTA TTACAGCCCA TGACGGCTTC
ACGTTGAACG ATCTGGTGTC TTATAACGAC AAGCATAATG AAGCCAATGG CGAAGATAAT
AATGATGGGC ATAATGATAA CCGCTCCTGT AATTATGGCG CAGAAGGGCC AACCGACGAC
GAAGGCATCA ATGCGATACG CGAGCAACAG AAACGCAATT TCCTGACCAC CTTGCTTTTC
TCGCACGGCA CGCCGATGTT ATTAGCGGGC GATGAGTTTG GCCGCAGTCA GATGGGCAAT
AATAACGGCT ACTGTCAGGA CAGTGAAATA TCGTGGGTCC ACTGGGATAA TTTGCCGGAA
ACCGCCAATG CGCTACGGGA GTTTACCCGT CATCTGATTC AACTGCGCGC CACGCAACCG
TTGCTGCGCC GGGAGAGCTG GCGTGACGGT CTGGAGATCC GCTGGTTTAA CGCCGGCGGA
GGGGCGCAGC AATCCGAACA ATGGGATGAG GGATCGACCA TAGGCGTATG CATTAGTCGT
CCCGATCTCC AGCCGGAAGC GGGGATCTGG CATGACGCCT TACTGCTTTT CAATCCGTTT
GAAGGCAGCG TACCGTTCCG TATTCCGATG TGGGGAGAAG GCGGCTGGGT ACTTGAACTG
ACGACTGCCG ATAACGCGCA GCAGGGAATG CGGATTACCG AAGAAATGGA TTTCGATCTG
GCCGGGCGCA GCATCGTATT ATTCAGACGC CCCTGA
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| Protein sequence | MTTNRAFEIR SGYSHTLGAN YDGEGVNFAI FSAHAERVEL CLYDPSGEHE IARLELPEYT
DEIWHGYVPK LQPGALYGYR VYGPYDPENG HRFNPNKLLI DPYARELVGD IQWNDAHFAY
QLLHDDKDLT FDDQDSAPFT PKCRVIDPDE ANWEDRQRPS IPWSNAIIYE THVKGFTQLN
SAIPEPLRGT FEGMGHKASV DYIKSLGITS VELLPVHWFP DDQHLLDKGL KNFWGYNSLG
FFAPATRYYG PKGIQGFRDM VRAFHDAGIE VILDVVYNHT AEGNELGPTL SFKGIDNFSY
YRTMPDQHRY YINDTGTGNT VNTSHPRVLQ MVMDSLRYWA ESMHVDGFRF DLGTILGREP
EGFDQRGGFF DAVTQDPVLA KLKLIGEPWD IGPGGYQVGG FPPGWGEWND KYRDTVREYW
KGDNVTNDFA ARLLGSGDLY DLRGRRPWSS VNFITAHDGF TLNDLVSYND KHNEANGEDN
NDGHNDNRSC NYGAEGPTDD EGINAIREQQ KRNFLTTLLF SHGTPMLLAG DEFGRSQMGN
NNGYCQDSEI SWVHWDNLPE TANALREFTR HLIQLRATQP LLRRESWRDG LEIRWFNAGG
GAQQSEQWDE GSTIGVCISR PDLQPEAGIW HDALLLFNPF EGSVPFRIPM WGEGGWVLEL
TTADNAQQGM RITEEMDFDL AGRSIVLFRR P
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