Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1650 |
Symbol | |
ID | 6483052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 1611443 |
End bp | 1613245 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642737035 |
Product | [Ni/Fe] hydrogenase large subunit |
Protein accession | YP_002040787 |
Protein GI | 194444301 |
COG category | [C] Energy production and conversion |
COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATATC CTTATCAGAC TCAGGGTTTT ACGCTGGACA ATAGCGGACG GCGAATTGTG GTCGATCCGG TTACTCGCAT CGAAGGGCAT ATGCGCTGCG AAGTGAATAT CGACAGTAAT AATGTCATTA CTAACGCCGT GTCGACCGGC ACCATGTGGC GCGGCCTGGA GGTTATCCTG AAAGGTCGCG ATCCGCGAGA CGCCTGGGCA TTCGTTGAAC GCATTTGCGG CGTCTGCACC GGTACACACG CTCTGACCTC AATCCGTGCC GTAGAAAATG CGCTGGGAAT CGCGATTCCG GACAACGCAA ACTGTATCCG TAATATGATG CAGGCTACGC TACACGTTCA CGATCACCTG GTGCATTTTT ATCATCTGCA CGCGCTGGAC TGGGTTGATG TGGTTGCGGC CCTGAAAGCC GACCCGCATC AGACCTCCGC CATCGCGCAA AGCCTTTCCG CATGGCCGCT ATCCTCGCCG GGATATTTCC GCGATTTGCA AAATCGACTG AAGCGGTTTA TCGAGTCCGG TCAACTTGGC CCTTTCCGTA ATGGCTACTG GGGACATCCG GCGATGAAAC TTCCGCCGGA AGCCAATTTG CTGGCGGTCG CCCACTATCT TGAAGCGCTC GATTTTCAAA AAGAGATCGT AAAAATTCAC ACCGTTTTCG GTGGTAAAAA CCCGCATCCT AACTGGCTGG TGGGCGGCGT TCCTTGCGCC ATCAACCTTG ACGAAACGGG CGCGGTCGGC GCAGTGAATA TGGAACGCCT GAACCTTGTC AGTTCCATCA TCCAAAAAGC TCGCCAGTTC TGCGAACAGG TTTATCTTCC GGACGTCTTG CTGATTGCCA GTTATTACAA AGACTGGGCA AAAATCGGCG GCGGGTTATC GAGCATGAAC CTGCTGGCTT ATGGCGAGTT TCCGGATAAC CCTAACGATT ATTCCGCCAG TAATCTTCTG CTTCCGCGTG GGGCTATCAT TAACGGTCGT TTCGACGAAA TTCATCCTGT CGATTTAACC GCCCCCGATG AGATTCAGGA GTTTGTCACT CACTCCTGGT ATACCTATGG TAACGGCAAT AACGATAAGG GCCTGCATCC GTGGGATGGT CTGACCGAAC CGCAACTGGT CATGGGCGAA CACTATAAAG GCACAAAAAC CTTTATCGAA CAGGTGGATG AGTCCGCTAA ATATTCATGG ATTAAATCGC CGCGCTGGAA GGGACATGCG ATGGAGGTAG GTCCGCTGGC GCGTTATCTG ATTGGATATC ATCAAAATAA ACCGGAATTT AAAGAACCTG TGGATCAACT GCTTAGTGTA TTAAAGCTGC CTAAAGAAGC GCTCTTTTCT ACATTAGGGC GTACTGCCGC GCGTGCGCTG GAATCCGTAT GGGCAGGCAA TACGCTGCAA TATTTCTTCG ATCGTCTGAT GCGTAACCTC AAGTCCGGCG ATACGGCGAC GGCAAACGTC ACGCTCTGGG AACCCGATAC CTGGCCTACA TCGGCAAAAG GCGTTGGTTT CAGCGAGGCG CCGCGCGGCG CGCTGGGGCA CTGGATAAAA ATTGAAAATC AGAAAATCGA CAGCTATCAG TGTGTGGTAC CGACAACCTG GAATGCCGGG CCACGTGACG ATAAAGGTCA AATTGGCGCG TACGAAGCGG CGTTAATGGG GACTAAACTC GCCGTTCCCG ATCAACCATT GGAGATTTTA CGTACTCTGC ACAGCTTCGA TCCCTGCCTG GCCTGCTCCA CCCATGTTAT TGATAATCAT GGAGGGGAGC TGGTCAGGGT TCAGGTACGA TGA
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Protein sequence | MAYPYQTQGF TLDNSGRRIV VDPVTRIEGH MRCEVNIDSN NVITNAVSTG TMWRGLEVIL KGRDPRDAWA FVERICGVCT GTHALTSIRA VENALGIAIP DNANCIRNMM QATLHVHDHL VHFYHLHALD WVDVVAALKA DPHQTSAIAQ SLSAWPLSSP GYFRDLQNRL KRFIESGQLG PFRNGYWGHP AMKLPPEANL LAVAHYLEAL DFQKEIVKIH TVFGGKNPHP NWLVGGVPCA INLDETGAVG AVNMERLNLV SSIIQKARQF CEQVYLPDVL LIASYYKDWA KIGGGLSSMN LLAYGEFPDN PNDYSASNLL LPRGAIINGR FDEIHPVDLT APDEIQEFVT HSWYTYGNGN NDKGLHPWDG LTEPQLVMGE HYKGTKTFIE QVDESAKYSW IKSPRWKGHA MEVGPLARYL IGYHQNKPEF KEPVDQLLSV LKLPKEALFS TLGRTAARAL ESVWAGNTLQ YFFDRLMRNL KSGDTATANV TLWEPDTWPT SAKGVGFSEA PRGALGHWIK IENQKIDSYQ CVVPTTWNAG PRDDKGQIGA YEAALMGTKL AVPDQPLEIL RTLHSFDPCL ACSTHVIDNH GGELVRVQVR
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