Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1637 |
Symbol | |
ID | 6486170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1600642 |
End bp | 1602030 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642737023 |
Product | putative succinate semialdehyde dehydrogenase |
Protein accession | YP_002040775 |
Protein GI | 194445423 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCATGA TGACTGCAAC ACAGGCGTTA TCCGTGAATC CTGCGACCGG CCAGACGCTG GCGGCAATGC CCTGGGCTAA CGCGCAAGAG ATTGAACATG CGCTGAATCT GGCGGCGAGC GGTTTCAAAA AGTGGAAATT GACATCGGTA GCGCAACGGG CGCAAACATT ACGCGATATT GGTCAGGCGC TTCGCGCTCA TGCAGAAGAG ATGGCGCAAT GTATTACGCG TGAAATGGGT AAACCCATAA AGCAGGCGCG TGCGGAAGTG ACGAAATCCG CCGCGTTATG CGACTGGTAT GCGGAACATG GCCCGGCAAT GCTGAATCCT GAGCCTACGC TGGTAGAAAA TCAGCAGGCG GTGATTGAAT ACCGTCCGCT GGGCGTCATC CTGGCGATAA TGCCGTGGAA TTTTCCTTTA TGGCAGGTGT TACGCGGGGC AGTGCCGATA CTGTTGGCGG GGAATAGCTA CTTGTTAAAA CATGCGCCCA ATGTCACGGG TTGCGCGCAG ATGATAGCCC GAATCTTGAC GGAAGCCGGT ACTCCTGCTG GCGTCTATGG ATGGGTGAAC GCCAATAATG AGGGCGTGAG TCAGATGATT AACGATCCGC GAATCGCGGC GGTGACGGTG ACCGGTAGCG TGCGCGCCGG CGCGGCGATT GGCGCTCAGG CTGGGGCGGC GCTGAAAAAG TGCGTACTGG AACTGGGTGG CTCGGATCCG TTTATTGTAC TCAATGATGC CGATCTCGAG CTGGCGGTAA AAGCCGCAGT TGCCGGACGC TATCAAAACA CCGGACAAGT CTGCGCCGCC GCCAAACGTT TTATTGTCGA AGAGGGCATT GCGCAGGCGT TTACCGATCG CTTTGTGGCG GCTGCCGCAG CATTAAAGAT GGGTGATCCT CTGGTTGAAG AGAATGACCT GGGGCCGATG GCGCGCTTTG ATCTGCGTGA TGAACTCCAT CAACAGGTGC AGGCTTCCGT CGCCGAAGGC GCACGGCTAC TGTTGGGCGG CGAGAAAATC GCCGGGGAGG GCAACTATTA TGCCGCGACC GTTCTGGCGG ATGTCACACC TGACATGACG GCATTTCGTC AGGAACTTTT TGGGCCTGTT GCCGCCATTA CCGTTGCAAA AGATGCGGCG CACGCCCTCG CGCTGGCGAA TGACAGTGAG TTTGGCCTGT CGGCGACGAT CTTTACCGCC GACGATACGC TGGCCGCAGA GATGGCGGCG CGTCTTGAGT GCGGTGGGGT ATTCATTAAT GGGTACAGCG CCAGCGATGC GCGTGTGGCA TTCGGCGGGG TGAAGAAAAG CGGCTTCGGT CGCGAGCTTT CGCACTTTGG TTTACACGAA TTTTGTAATG TGCAGACCGT CTGGAAGAAC CGCGTCTAA
|
Protein sequence | MTMMTATQAL SVNPATGQTL AAMPWANAQE IEHALNLAAS GFKKWKLTSV AQRAQTLRDI GQALRAHAEE MAQCITREMG KPIKQARAEV TKSAALCDWY AEHGPAMLNP EPTLVENQQA VIEYRPLGVI LAIMPWNFPL WQVLRGAVPI LLAGNSYLLK HAPNVTGCAQ MIARILTEAG TPAGVYGWVN ANNEGVSQMI NDPRIAAVTV TGSVRAGAAI GAQAGAALKK CVLELGGSDP FIVLNDADLE LAVKAAVAGR YQNTGQVCAA AKRFIVEEGI AQAFTDRFVA AAAALKMGDP LVEENDLGPM ARFDLRDELH QQVQASVAEG ARLLLGGEKI AGEGNYYAAT VLADVTPDMT AFRQELFGPV AAITVAKDAA HALALANDSE FGLSATIFTA DDTLAAEMAA RLECGGVFIN GYSASDARVA FGGVKKSGFG RELSHFGLHE FCNVQTVWKN RV
|
| |